Protein–RNA interactions for Protein: Q8K3F2

Mmp21, Matrix metalloproteinase-21, mousemouse

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp21Q8K3F2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Mmp21Q8K3F2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Mmp21Q8K3F2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.07■■□□□ 1.6
Mmp21Q8K3F2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Mmp21Q8K3F2 Peli2-204ENSMUST00000226513 1320 ntBASIC25.05■■□□□ 1.6
Mmp21Q8K3F2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Mmp21Q8K3F2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Mmp21Q8K3F2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Mmp21Q8K3F2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Mmp21Q8K3F2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.99■■□□□ 1.59
Mmp21Q8K3F2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mmp21Q8K3F2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Mmp21Q8K3F2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Mmp21Q8K3F2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Mmp21Q8K3F2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Mmp21Q8K3F2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mmp21Q8K3F2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
Mmp21Q8K3F2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Mmp21Q8K3F2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Mmp21Q8K3F2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Mmp21Q8K3F2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Mmp21Q8K3F2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Mmp21Q8K3F2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Mmp21Q8K3F2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Mmp21Q8K3F2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.89■■□□□ 1.57
Mmp21Q8K3F2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.88■■□□□ 1.57
Mmp21Q8K3F2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Mmp21Q8K3F2 Gm16148-201ENSMUST00000119653 893 ntBASIC24.85■■□□□ 1.57
Mmp21Q8K3F2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Mmp21Q8K3F2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Mmp21Q8K3F2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Mmp21Q8K3F2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Mmp21Q8K3F2 Zfp131-205ENSMUST00000223812 663 ntBASIC24.81■■□□□ 1.56
Mmp21Q8K3F2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Mmp21Q8K3F2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Mmp21Q8K3F2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Mmp21Q8K3F2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mmp21Q8K3F2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Mmp21Q8K3F2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Mmp21Q8K3F2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Mmp21Q8K3F2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Mmp21Q8K3F2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mmp21Q8K3F2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mmp21Q8K3F2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
Mmp21Q8K3F2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Mmp21Q8K3F2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Mmp21Q8K3F2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Mmp21Q8K3F2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Mmp21Q8K3F2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.67■■□□□ 1.54
Mmp21Q8K3F2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Mmp21Q8K3F2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
Mmp21Q8K3F2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.64■■□□□ 1.54
Mmp21Q8K3F2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Mmp21Q8K3F2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.62■■□□□ 1.53
Mmp21Q8K3F2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.61■■□□□ 1.53
Mmp21Q8K3F2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Mmp21Q8K3F2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Mmp21Q8K3F2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Mmp21Q8K3F2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Mmp21Q8K3F2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Mmp21Q8K3F2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Mmp21Q8K3F2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Mmp21Q8K3F2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Mmp21Q8K3F2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Mmp21Q8K3F2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Mmp21Q8K3F2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Mmp21Q8K3F2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Mmp21Q8K3F2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Mmp21Q8K3F2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Mmp21Q8K3F2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.52■■□□□ 1.52
Mmp21Q8K3F2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Mmp21Q8K3F2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.47■■□□□ 1.51
Mmp21Q8K3F2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Mmp21Q8K3F2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.47■■□□□ 1.51
Mmp21Q8K3F2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Mmp21Q8K3F2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Mmp21Q8K3F2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Mmp21Q8K3F2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Mmp21Q8K3F2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.44■■□□□ 1.5
Mmp21Q8K3F2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Mmp21Q8K3F2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mmp21Q8K3F2 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.43■■□□□ 1.5
Mmp21Q8K3F2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.42■■□□□ 1.5
Mmp21Q8K3F2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp21Q8K3F2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Mmp21Q8K3F2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.4■■□□□ 1.5
Mmp21Q8K3F2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mmp21Q8K3F2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.4■■□□□ 1.5
Mmp21Q8K3F2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mmp21Q8K3F2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Mmp21Q8K3F2 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.36■■□□□ 1.49
Mmp21Q8K3F2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Mmp21Q8K3F2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Mmp21Q8K3F2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Mmp21Q8K3F2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mmp21Q8K3F2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp21Q8K3F2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Mmp21Q8K3F2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp21Q8K3F2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Mmp21Q8K3F2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms