Protein–RNA interactions for Protein: Q8K1C9

Lrrc41, Leucine-rich repeat-containing protein 41, mousemouse

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc41Q8K1C9 Gm24804-201ENSMUST00000174982 85 ntBASIC29.01■■■□□ 2.23
Lrrc41Q8K1C9 AC166822.3-201ENSMUST00000227394 661 ntBASIC29■■■□□ 2.23
Lrrc41Q8K1C9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Lrrc41Q8K1C9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.99■■■□□ 2.23
Lrrc41Q8K1C9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
Lrrc41Q8K1C9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lrrc41Q8K1C9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Lrrc41Q8K1C9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Lrrc41Q8K1C9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.91■■■□□ 2.22
Lrrc41Q8K1C9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lrrc41Q8K1C9 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.89■■■□□ 2.22
Lrrc41Q8K1C9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Lrrc41Q8K1C9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lrrc41Q8K1C9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lrrc41Q8K1C9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Lrrc41Q8K1C9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Lrrc41Q8K1C9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Lrrc41Q8K1C9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Lrrc41Q8K1C9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Lrrc41Q8K1C9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Lrrc41Q8K1C9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Lrrc41Q8K1C9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Lrrc41Q8K1C9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lrrc41Q8K1C9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lrrc41Q8K1C9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Lrrc41Q8K1C9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Lrrc41Q8K1C9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lrrc41Q8K1C9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lrrc41Q8K1C9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lrrc41Q8K1C9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Lrrc41Q8K1C9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Lrrc41Q8K1C9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Lrrc41Q8K1C9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Lrrc41Q8K1C9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.6■■■□□ 2.17
Lrrc41Q8K1C9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lrrc41Q8K1C9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lrrc41Q8K1C9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Lrrc41Q8K1C9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Lrrc41Q8K1C9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
Lrrc41Q8K1C9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Lrrc41Q8K1C9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Lrrc41Q8K1C9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lrrc41Q8K1C9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Lrrc41Q8K1C9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Lrrc41Q8K1C9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Lrrc41Q8K1C9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lrrc41Q8K1C9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lrrc41Q8K1C9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lrrc41Q8K1C9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lrrc41Q8K1C9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Lrrc41Q8K1C9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.48■■■□□ 2.15
Lrrc41Q8K1C9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Lrrc41Q8K1C9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.46■■■□□ 2.15
Lrrc41Q8K1C9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Lrrc41Q8K1C9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Lrrc41Q8K1C9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.43■■■□□ 2.14
Lrrc41Q8K1C9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Lrrc41Q8K1C9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Lrrc41Q8K1C9 Peli2-204ENSMUST00000226513 1320 ntBASIC28.4■■■□□ 2.14
Lrrc41Q8K1C9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Lrrc41Q8K1C9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.39■■■□□ 2.14
Lrrc41Q8K1C9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Lrrc41Q8K1C9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Lrrc41Q8K1C9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Lrrc41Q8K1C9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.37■■■□□ 2.13
Lrrc41Q8K1C9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Lrrc41Q8K1C9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Lrrc41Q8K1C9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Lrrc41Q8K1C9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lrrc41Q8K1C9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lrrc41Q8K1C9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Lrrc41Q8K1C9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
Lrrc41Q8K1C9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.32■■■□□ 2.12
Lrrc41Q8K1C9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Lrrc41Q8K1C9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Lrrc41Q8K1C9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.29■■■□□ 2.12
Lrrc41Q8K1C9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Lrrc41Q8K1C9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Lrrc41Q8K1C9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc41Q8K1C9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc41Q8K1C9 Zfp131-205ENSMUST00000223812 663 ntBASIC28.25■■■□□ 2.11
Lrrc41Q8K1C9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc41Q8K1C9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc41Q8K1C9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrrc41Q8K1C9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.23■■■□□ 2.11
Lrrc41Q8K1C9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lrrc41Q8K1C9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Lrrc41Q8K1C9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lrrc41Q8K1C9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.19■■■□□ 2.1
Lrrc41Q8K1C9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
Lrrc41Q8K1C9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Lrrc41Q8K1C9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrrc41Q8K1C9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrrc41Q8K1C9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Lrrc41Q8K1C9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Lrrc41Q8K1C9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Lrrc41Q8K1C9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Lrrc41Q8K1C9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.12■■■□□ 2.09
Lrrc41Q8K1C9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Lrrc41Q8K1C9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 154.7 ms