Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.44■■□□□ 1.5
Rfwd3Q8CIK8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rfwd3Q8CIK8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.41■■□□□ 1.5
Rfwd3Q8CIK8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rfwd3Q8CIK8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rfwd3Q8CIK8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.37■■□□□ 1.49
Rfwd3Q8CIK8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Rfwd3Q8CIK8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rfwd3Q8CIK8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rfwd3Q8CIK8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rfwd3Q8CIK8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.33■■□□□ 1.48
Rfwd3Q8CIK8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rfwd3Q8CIK8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Rfwd3Q8CIK8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rfwd3Q8CIK8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rfwd3Q8CIK8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rfwd3Q8CIK8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.28■■□□□ 1.48
Rfwd3Q8CIK8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Rfwd3Q8CIK8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rfwd3Q8CIK8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rfwd3Q8CIK8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rfwd3Q8CIK8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rfwd3Q8CIK8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rfwd3Q8CIK8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rfwd3Q8CIK8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rfwd3Q8CIK8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.2■■□□□ 1.46
Rfwd3Q8CIK8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rfwd3Q8CIK8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.19■■□□□ 1.46
Rfwd3Q8CIK8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rfwd3Q8CIK8 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.18■■□□□ 1.46
Rfwd3Q8CIK8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfwd3Q8CIK8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rfwd3Q8CIK8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rfwd3Q8CIK8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rfwd3Q8CIK8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfwd3Q8CIK8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rfwd3Q8CIK8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
Rfwd3Q8CIK8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfwd3Q8CIK8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfwd3Q8CIK8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rfwd3Q8CIK8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rfwd3Q8CIK8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Rfwd3Q8CIK8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rfwd3Q8CIK8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.07■■□□□ 1.44
Rfwd3Q8CIK8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rfwd3Q8CIK8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rfwd3Q8CIK8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.05■■□□□ 1.44
Rfwd3Q8CIK8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rfwd3Q8CIK8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfwd3Q8CIK8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfwd3Q8CIK8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Rfwd3Q8CIK8 Gm6658-202ENSMUST00000209493 1885 ntBASIC24■■□□□ 1.43
Rfwd3Q8CIK8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Rfwd3Q8CIK8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfwd3Q8CIK8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Rfwd3Q8CIK8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfwd3Q8CIK8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rfwd3Q8CIK8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rfwd3Q8CIK8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rfwd3Q8CIK8 Gm16148-201ENSMUST00000119653 893 ntBASIC23.92■■□□□ 1.42
Rfwd3Q8CIK8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfwd3Q8CIK8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfwd3Q8CIK8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfwd3Q8CIK8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rfwd3Q8CIK8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Rfwd3Q8CIK8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.87■■□□□ 1.41
Rfwd3Q8CIK8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rfwd3Q8CIK8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfwd3Q8CIK8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rfwd3Q8CIK8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rfwd3Q8CIK8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.82■■□□□ 1.4
Rfwd3Q8CIK8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Rfwd3Q8CIK8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.82■■□□□ 1.4
Rfwd3Q8CIK8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Rfwd3Q8CIK8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rfwd3Q8CIK8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rfwd3Q8CIK8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rfwd3Q8CIK8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfwd3Q8CIK8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfwd3Q8CIK8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rfwd3Q8CIK8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.78■■□□□ 1.4
Rfwd3Q8CIK8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfwd3Q8CIK8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Rfwd3Q8CIK8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rfwd3Q8CIK8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rfwd3Q8CIK8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rfwd3Q8CIK8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rfwd3Q8CIK8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rfwd3Q8CIK8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfwd3Q8CIK8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rfwd3Q8CIK8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rfwd3Q8CIK8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfwd3Q8CIK8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rfwd3Q8CIK8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Rfwd3Q8CIK8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfwd3Q8CIK8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rfwd3Q8CIK8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rfwd3Q8CIK8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.67■■□□□ 1.38
Rfwd3Q8CIK8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Rfwd3Q8CIK8 Zfp131-205ENSMUST00000223812 663 ntBASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms