Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
Smc2Q8CG48 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Smc2Q8CG48 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Smc2Q8CG48 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc2Q8CG48 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.81■■■□□ 2.36
Smc2Q8CG48 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc2Q8CG48 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.79■■■□□ 2.36
Smc2Q8CG48 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc2Q8CG48 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc2Q8CG48 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc2Q8CG48 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc2Q8CG48 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc2Q8CG48 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
Smc2Q8CG48 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Smc2Q8CG48 Gm26115-201ENSMUST00000175605 87 ntBASIC29.67■■■□□ 2.34
Smc2Q8CG48 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc2Q8CG48 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc2Q8CG48 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Smc2Q8CG48 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Smc2Q8CG48 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smc2Q8CG48 Gm8109-201ENSMUST00000194076 746 ntBASIC29.54■■■□□ 2.32
Smc2Q8CG48 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
Smc2Q8CG48 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Smc2Q8CG48 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Smc2Q8CG48 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Smc2Q8CG48 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Smc2Q8CG48 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Smc2Q8CG48 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc2Q8CG48 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc2Q8CG48 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Smc2Q8CG48 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Smc2Q8CG48 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.43■■■□□ 2.3
Smc2Q8CG48 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Smc2Q8CG48 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc2Q8CG48 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smc2Q8CG48 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Smc2Q8CG48 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc2Q8CG48 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Smc2Q8CG48 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc2Q8CG48 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smc2Q8CG48 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.36■■■□□ 2.29
Smc2Q8CG48 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Smc2Q8CG48 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Smc2Q8CG48 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Smc2Q8CG48 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc2Q8CG48 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc2Q8CG48 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc2Q8CG48 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Smc2Q8CG48 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.26■■■□□ 2.27
Smc2Q8CG48 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Smc2Q8CG48 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Smc2Q8CG48 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.21■■■□□ 2.27
Smc2Q8CG48 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Smc2Q8CG48 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Smc2Q8CG48 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Smc2Q8CG48 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Smc2Q8CG48 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Smc2Q8CG48 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Smc2Q8CG48 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smc2Q8CG48 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Smc2Q8CG48 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Smc2Q8CG48 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Smc2Q8CG48 Peli2-204ENSMUST00000226513 1320 ntBASIC29.09■■■□□ 2.25
Smc2Q8CG48 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
Smc2Q8CG48 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.07■■■□□ 2.24
Smc2Q8CG48 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smc2Q8CG48 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc2Q8CG48 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc2Q8CG48 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.04■■■□□ 2.24
Smc2Q8CG48 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Smc2Q8CG48 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29■■■□□ 2.23
Smc2Q8CG48 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Smc2Q8CG48 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29■■■□□ 2.23
Smc2Q8CG48 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
Smc2Q8CG48 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Smc2Q8CG48 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.97■■■□□ 2.23
Smc2Q8CG48 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Smc2Q8CG48 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Smc2Q8CG48 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Smc2Q8CG48 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms