Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
Smc2Q8CG48 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Smc2Q8CG48 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Smc2Q8CG48 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc2Q8CG48 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.81■■■□□ 2.36
Smc2Q8CG48 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc2Q8CG48 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.79■■■□□ 2.36
Smc2Q8CG48 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc2Q8CG48 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc2Q8CG48 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc2Q8CG48 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc2Q8CG48 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc2Q8CG48 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
Smc2Q8CG48 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Smc2Q8CG48 Gm26115-201ENSMUST00000175605 87 ntBASIC29.67■■■□□ 2.34
Smc2Q8CG48 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc2Q8CG48 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Smc2Q8CG48 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Smc2Q8CG48 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Smc2Q8CG48 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Smc2Q8CG48 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Smc2Q8CG48 Gm8109-201ENSMUST00000194076 746 ntBASIC29.54■■■□□ 2.32
Smc2Q8CG48 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
Smc2Q8CG48 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Smc2Q8CG48 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Smc2Q8CG48 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Smc2Q8CG48 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Smc2Q8CG48 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.48■■■□□ 2.31
Smc2Q8CG48 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Smc2Q8CG48 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc2Q8CG48 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc2Q8CG48 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Smc2Q8CG48 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Smc2Q8CG48 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.43■■■□□ 2.3
Smc2Q8CG48 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Smc2Q8CG48 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc2Q8CG48 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smc2Q8CG48 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Smc2Q8CG48 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc2Q8CG48 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Smc2Q8CG48 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc2Q8CG48 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smc2Q8CG48 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.36■■■□□ 2.29
Smc2Q8CG48 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Smc2Q8CG48 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Smc2Q8CG48 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Smc2Q8CG48 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Smc2Q8CG48 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Smc2Q8CG48 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Smc2Q8CG48 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Smc2Q8CG48 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Smc2Q8CG48 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.26■■■□□ 2.27
Smc2Q8CG48 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Smc2Q8CG48 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Smc2Q8CG48 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.21■■■□□ 2.27
Smc2Q8CG48 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Smc2Q8CG48 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Smc2Q8CG48 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Smc2Q8CG48 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Smc2Q8CG48 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Smc2Q8CG48 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Smc2Q8CG48 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smc2Q8CG48 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Smc2Q8CG48 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Smc2Q8CG48 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Smc2Q8CG48 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Smc2Q8CG48 Peli2-204ENSMUST00000226513 1320 ntBASIC29.09■■■□□ 2.25
Smc2Q8CG48 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.08■■■□□ 2.25
Smc2Q8CG48 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
Smc2Q8CG48 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.07■■■□□ 2.24
Smc2Q8CG48 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smc2Q8CG48 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc2Q8CG48 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc2Q8CG48 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.04■■■□□ 2.24
Smc2Q8CG48 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Smc2Q8CG48 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc2Q8CG48 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29■■■□□ 2.23
Smc2Q8CG48 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Smc2Q8CG48 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29■■■□□ 2.23
Smc2Q8CG48 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
Smc2Q8CG48 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Smc2Q8CG48 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.97■■■□□ 2.23
Smc2Q8CG48 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Smc2Q8CG48 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Smc2Q8CG48 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Smc2Q8CG48 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms