Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Cabcoco1Q8CDT7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25,3■■□□□ 1,64
Cabcoco1Q8CDT7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Cabcoco1Q8CDT7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Cabcoco1Q8CDT7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25,27■■□□□ 1,64
Cabcoco1Q8CDT7 Rab21-202ENSMUST00000218831 843 ntBASIC25,27■■□□□ 1,64
Cabcoco1Q8CDT7 Gm9905-201ENSMUST00000065740 1845 ntBASIC25,27■■□□□ 1,64
Cabcoco1Q8CDT7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Cabcoco1Q8CDT7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25,25■■□□□ 1,63
Cabcoco1Q8CDT7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25,24■■□□□ 1,63
Cabcoco1Q8CDT7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,23■■□□□ 1,63
Cabcoco1Q8CDT7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Cabcoco1Q8CDT7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Cabcoco1Q8CDT7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25,21■■□□□ 1,63
Cabcoco1Q8CDT7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Cabcoco1Q8CDT7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25,21■■□□□ 1,63
Cabcoco1Q8CDT7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25,21■■□□□ 1,63
Cabcoco1Q8CDT7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Cabcoco1Q8CDT7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,2■■□□□ 1,63
Cabcoco1Q8CDT7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,62
Cabcoco1Q8CDT7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,2■■□□□ 1,62
Cabcoco1Q8CDT7 Gm6206-201ENSMUST00000133472 2199 ntBASIC25,18■■□□□ 1,62
Cabcoco1Q8CDT7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25,18■■□□□ 1,62
Cabcoco1Q8CDT7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Cabcoco1Q8CDT7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Cabcoco1Q8CDT7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25,15■■□□□ 1,62
Cabcoco1Q8CDT7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25,13■■□□□ 1,61
Cabcoco1Q8CDT7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,12■■□□□ 1,61
Cabcoco1Q8CDT7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Cabcoco1Q8CDT7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25,11■■□□□ 1,61
Cabcoco1Q8CDT7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Cabcoco1Q8CDT7 Zxda-201ENSMUST00000117281 2621 ntBASIC25,09■■□□□ 1,61
Cabcoco1Q8CDT7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Cabcoco1Q8CDT7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Cabcoco1Q8CDT7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25,07■■□□□ 1,6
Cabcoco1Q8CDT7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,06■■□□□ 1,6
Cabcoco1Q8CDT7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,05■■□□□ 1,6
Cabcoco1Q8CDT7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25,05■■□□□ 1,6
Cabcoco1Q8CDT7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,05■■□□□ 1,6
Cabcoco1Q8CDT7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Cabcoco1Q8CDT7 Mipep-204ENSMUST00000225043 1548 ntBASIC25,04■■□□□ 1,6
Cabcoco1Q8CDT7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25,04■■□□□ 1,6
Cabcoco1Q8CDT7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25,04■■□□□ 1,6
Cabcoco1Q8CDT7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25,04■■□□□ 1,6
Cabcoco1Q8CDT7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,03■■□□□ 1,6
Cabcoco1Q8CDT7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,02■■□□□ 1,6
Cabcoco1Q8CDT7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Cabcoco1Q8CDT7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Cabcoco1Q8CDT7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Cabcoco1Q8CDT7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Cabcoco1Q8CDT7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Cabcoco1Q8CDT7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
Cabcoco1Q8CDT7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Cabcoco1Q8CDT7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24,97■■□□□ 1,59
Cabcoco1Q8CDT7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24,96■■□□□ 1,59
Cabcoco1Q8CDT7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Cabcoco1Q8CDT7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24,95■■□□□ 1,58
Cabcoco1Q8CDT7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24,95■■□□□ 1,58
Cabcoco1Q8CDT7 Gm43445-201ENSMUST00000198564 2091 ntBASIC24,94■■□□□ 1,58
Cabcoco1Q8CDT7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24,94■■□□□ 1,58
Cabcoco1Q8CDT7 AL845457.1-201ENSMUST00000197244 68 ntBASIC24,93■■□□□ 1,58
Cabcoco1Q8CDT7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24,93■■□□□ 1,58
Cabcoco1Q8CDT7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24,93■■□□□ 1,58
Cabcoco1Q8CDT7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24,9■■□□□ 1,58
Cabcoco1Q8CDT7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,57
Cabcoco1Q8CDT7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24,88■■□□□ 1,57
Cabcoco1Q8CDT7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24,88■■□□□ 1,57
Cabcoco1Q8CDT7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24,87■■□□□ 1,57
Cabcoco1Q8CDT7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24,87■■□□□ 1,57
Cabcoco1Q8CDT7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
Cabcoco1Q8CDT7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,86■■□□□ 1,57
Cabcoco1Q8CDT7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24,85■■□□□ 1,57
Cabcoco1Q8CDT7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24,84■■□□□ 1,57
Cabcoco1Q8CDT7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24,84■■□□□ 1,57
Cabcoco1Q8CDT7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24,84■■□□□ 1,57
Cabcoco1Q8CDT7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24,83■■□□□ 1,57
Cabcoco1Q8CDT7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24,83■■□□□ 1,57
Cabcoco1Q8CDT7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,57
Cabcoco1Q8CDT7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,56
Cabcoco1Q8CDT7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Cabcoco1Q8CDT7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Cabcoco1Q8CDT7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24,78■■□□□ 1,56
Cabcoco1Q8CDT7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Cabcoco1Q8CDT7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24,77■■□□□ 1,56
Cabcoco1Q8CDT7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Cabcoco1Q8CDT7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24,77■■□□□ 1,56
Cabcoco1Q8CDT7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24,75■■□□□ 1,55
Cabcoco1Q8CDT7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24,75■■□□□ 1,55
Cabcoco1Q8CDT7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
Cabcoco1Q8CDT7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Cabcoco1Q8CDT7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24,73■■□□□ 1,55
Cabcoco1Q8CDT7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24,71■■□□□ 1,55
Cabcoco1Q8CDT7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Cabcoco1Q8CDT7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24,66■■□□□ 1,54
Cabcoco1Q8CDT7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24,66■■□□□ 1,54
Cabcoco1Q8CDT7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Cabcoco1Q8CDT7 Amer2-203ENSMUST00000225247 2662 ntBASIC24,65■■□□□ 1,54
Cabcoco1Q8CDT7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Cabcoco1Q8CDT7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Cabcoco1Q8CDT7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24,63■■□□□ 1,53
Retrieved 100 of 76,532 protein–RNA pairs in 11,9 ms