Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Mipep-204ENSMUST00000225043 1548 ntBASIC26,39■■□□□ 1,82
Rfx6Q8C7R7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26,38■■□□□ 1,81
Rfx6Q8C7R7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Rfx6Q8C7R7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26,37■■□□□ 1,81
Rfx6Q8C7R7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Rfx6Q8C7R7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26,35■■□□□ 1,81
Rfx6Q8C7R7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26,33■■□□□ 1,81
Rfx6Q8C7R7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Rfx6Q8C7R7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Rfx6Q8C7R7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Rfx6Q8C7R7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26,3■■□□□ 1,8
Rfx6Q8C7R7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfx6Q8C7R7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfx6Q8C7R7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfx6Q8C7R7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26,29■■□□□ 1,8
Rfx6Q8C7R7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26,28■■□□□ 1,8
Rfx6Q8C7R7 Gm25262-201ENSMUST00000174934 133 ntBASIC26,26■■□□□ 1,79
Rfx6Q8C7R7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26,25■■□□□ 1,79
Rfx6Q8C7R7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26,24■■□□□ 1,79
Rfx6Q8C7R7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Rfx6Q8C7R7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Rfx6Q8C7R7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26,21■■□□□ 1,79
Rfx6Q8C7R7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,79
Rfx6Q8C7R7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Rfx6Q8C7R7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Rfx6Q8C7R7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26,15■■□□□ 1,78
Rfx6Q8C7R7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26,12■■□□□ 1,77
Rfx6Q8C7R7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Rfx6Q8C7R7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26,08■■□□□ 1,77
Rfx6Q8C7R7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Rfx6Q8C7R7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26,07■■□□□ 1,76
Rfx6Q8C7R7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26,06■■□□□ 1,76
Rfx6Q8C7R7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Rfx6Q8C7R7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Rfx6Q8C7R7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Rfx6Q8C7R7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Rfx6Q8C7R7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Rfx6Q8C7R7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Rfx6Q8C7R7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26■■□□□ 1,75
Rfx6Q8C7R7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1,75
Rfx6Q8C7R7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,98■■□□□ 1,75
Rfx6Q8C7R7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Rfx6Q8C7R7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
Rfx6Q8C7R7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25,98■■□□□ 1,75
Rfx6Q8C7R7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25,97■■□□□ 1,75
Rfx6Q8C7R7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,97■■□□□ 1,75
Rfx6Q8C7R7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,97■■□□□ 1,75
Rfx6Q8C7R7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,97■■□□□ 1,75
Rfx6Q8C7R7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25,97■■□□□ 1,75
Rfx6Q8C7R7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,74
Rfx6Q8C7R7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Rfx6Q8C7R7 Gm9905-201ENSMUST00000065740 1845 ntBASIC25,94■■□□□ 1,74
Rfx6Q8C7R7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Rfx6Q8C7R7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25,93■■□□□ 1,74
Rfx6Q8C7R7 Gm6206-201ENSMUST00000133472 2199 ntBASIC25,92■■□□□ 1,74
Rfx6Q8C7R7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25,92■■□□□ 1,74
Rfx6Q8C7R7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,9■■□□□ 1,74
Rfx6Q8C7R7 Zxda-201ENSMUST00000117281 2621 ntBASIC25,9■■□□□ 1,74
Rfx6Q8C7R7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,89■■□□□ 1,74
Rfx6Q8C7R7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25,88■■□□□ 1,73
Rfx6Q8C7R7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Rfx6Q8C7R7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25,86■■□□□ 1,73
Rfx6Q8C7R7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,86■■□□□ 1,73
Rfx6Q8C7R7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Rfx6Q8C7R7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25,83■■□□□ 1,72
Rfx6Q8C7R7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25,82■■□□□ 1,72
Rfx6Q8C7R7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rfx6Q8C7R7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Rfx6Q8C7R7 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,82■■□□□ 1,72
Rfx6Q8C7R7 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,81■■□□□ 1,72
Rfx6Q8C7R7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,81■■□□□ 1,72
Rfx6Q8C7R7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,8■■□□□ 1,72
Rfx6Q8C7R7 Gm27322-201ENSMUST00000184007 104 ntBASIC25,8■■□□□ 1,72
Rfx6Q8C7R7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25,79■■□□□ 1,72
Rfx6Q8C7R7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25,77■■□□□ 1,72
Rfx6Q8C7R7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25,76■■□□□ 1,71
Rfx6Q8C7R7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Rfx6Q8C7R7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25,74■■□□□ 1,71
Rfx6Q8C7R7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,74■■□□□ 1,71
Rfx6Q8C7R7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25,74■■□□□ 1,71
Rfx6Q8C7R7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25,74■■□□□ 1,71
Rfx6Q8C7R7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Rfx6Q8C7R7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Rfx6Q8C7R7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Rfx6Q8C7R7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Rfx6Q8C7R7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Rfx6Q8C7R7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rfx6Q8C7R7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rfx6Q8C7R7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Rfx6Q8C7R7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25,69■■□□□ 1,7
Rfx6Q8C7R7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,65■■□□□ 1,7
Rfx6Q8C7R7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25,65■■□□□ 1,7
Rfx6Q8C7R7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Rfx6Q8C7R7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Rfx6Q8C7R7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Rfx6Q8C7R7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25,61■■□□□ 1,69
Rfx6Q8C7R7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25,61■■□□□ 1,69
Rfx6Q8C7R7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25,61■■□□□ 1,69
Rfx6Q8C7R7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Rfx6Q8C7R7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,6■■□□□ 1,69
Retrieved 100 of 76,532 protein–RNA pairs in 9,8 ms