Protein–RNA interactions for Protein: Q8C2B3

Hdac7, Histone deacetylase 7, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac7Q8C2B3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Hdac7Q8C2B3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Hdac7Q8C2B3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Hdac7Q8C2B3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hdac7Q8C2B3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.61■■□□□ 1.85
Hdac7Q8C2B3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.61■■□□□ 1.85
Hdac7Q8C2B3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Hdac7Q8C2B3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Hdac7Q8C2B3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Hdac7Q8C2B3 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.58■■□□□ 1.85
Hdac7Q8C2B3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Hdac7Q8C2B3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Hdac7Q8C2B3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Hdac7Q8C2B3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Hdac7Q8C2B3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hdac7Q8C2B3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hdac7Q8C2B3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hdac7Q8C2B3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Hdac7Q8C2B3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Hdac7Q8C2B3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Hdac7Q8C2B3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Hdac7Q8C2B3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hdac7Q8C2B3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.46■■□□□ 1.83
Hdac7Q8C2B3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hdac7Q8C2B3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Hdac7Q8C2B3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hdac7Q8C2B3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Hdac7Q8C2B3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Hdac7Q8C2B3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hdac7Q8C2B3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Hdac7Q8C2B3 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.36■■□□□ 1.81
Hdac7Q8C2B3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Hdac7Q8C2B3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Hdac7Q8C2B3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hdac7Q8C2B3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hdac7Q8C2B3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.32■■□□□ 1.8
Hdac7Q8C2B3 Gm16148-201ENSMUST00000119653 893 ntBASIC26.29■■□□□ 1.8
Hdac7Q8C2B3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.29■■□□□ 1.8
Hdac7Q8C2B3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac7Q8C2B3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac7Q8C2B3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Hdac7Q8C2B3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac7Q8C2B3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac7Q8C2B3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac7Q8C2B3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac7Q8C2B3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.21■■□□□ 1.79
Hdac7Q8C2B3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hdac7Q8C2B3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Hdac7Q8C2B3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Hdac7Q8C2B3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac7Q8C2B3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac7Q8C2B3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac7Q8C2B3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac7Q8C2B3 Peli2-204ENSMUST00000226513 1320 ntBASIC26.15■■□□□ 1.78
Hdac7Q8C2B3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.15■■□□□ 1.78
Hdac7Q8C2B3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Hdac7Q8C2B3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Hdac7Q8C2B3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Hdac7Q8C2B3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hdac7Q8C2B3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Hdac7Q8C2B3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac7Q8C2B3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Hdac7Q8C2B3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Hdac7Q8C2B3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Hdac7Q8C2B3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Hdac7Q8C2B3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.05■■□□□ 1.76
Hdac7Q8C2B3 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.05■■□□□ 1.76
Hdac7Q8C2B3 Mipep-204ENSMUST00000225043 1548 ntBASIC26.04■■□□□ 1.76
Hdac7Q8C2B3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.04■■□□□ 1.76
Hdac7Q8C2B3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Hdac7Q8C2B3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hdac7Q8C2B3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Hdac7Q8C2B3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hdac7Q8C2B3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Hdac7Q8C2B3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
Hdac7Q8C2B3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Hdac7Q8C2B3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Hdac7Q8C2B3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Hdac7Q8C2B3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hdac7Q8C2B3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Hdac7Q8C2B3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hdac7Q8C2B3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.94■■□□□ 1.74
Hdac7Q8C2B3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hdac7Q8C2B3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hdac7Q8C2B3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.93■■□□□ 1.74
Hdac7Q8C2B3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hdac7Q8C2B3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hdac7Q8C2B3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.89■■□□□ 1.74
Hdac7Q8C2B3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Hdac7Q8C2B3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Hdac7Q8C2B3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac7Q8C2B3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hdac7Q8C2B3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Hdac7Q8C2B3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Hdac7Q8C2B3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Hdac7Q8C2B3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Hdac7Q8C2B3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Hdac7Q8C2B3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Hdac7Q8C2B3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.82■■□□□ 1.72
Hdac7Q8C2B3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms