Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tsen54Q8C2A2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tsen54Q8C2A2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tsen54Q8C2A2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tsen54Q8C2A2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tsen54Q8C2A2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tsen54Q8C2A2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen54Q8C2A2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.33■■□□□ 1.01
Tsen54Q8C2A2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.32■■□□□ 1
Tsen54Q8C2A2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Tsen54Q8C2A2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tsen54Q8C2A2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tsen54Q8C2A2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tsen54Q8C2A2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tsen54Q8C2A2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Tsen54Q8C2A2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tsen54Q8C2A2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tsen54Q8C2A2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tsen54Q8C2A2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tsen54Q8C2A2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tsen54Q8C2A2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tsen54Q8C2A2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tsen54Q8C2A2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tsen54Q8C2A2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tsen54Q8C2A2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tsen54Q8C2A2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tsen54Q8C2A2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Tsen54Q8C2A2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tsen54Q8C2A2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tsen54Q8C2A2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tsen54Q8C2A2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tsen54Q8C2A2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tsen54Q8C2A2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tsen54Q8C2A2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tsen54Q8C2A2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.02■□□□□ 0.96
Tsen54Q8C2A2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tsen54Q8C2A2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Tsen54Q8C2A2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tsen54Q8C2A2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tsen54Q8C2A2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tsen54Q8C2A2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tsen54Q8C2A2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Gm26115-201ENSMUST00000175605 87 ntBASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms