Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps9d1Q8C190 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vps9d1Q8C190 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Vps9d1Q8C190 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Vps9d1Q8C190 Gm8109-201ENSMUST00000194076 746 ntBASIC24.13■■□□□ 1.45
Vps9d1Q8C190 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
Vps9d1Q8C190 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.12■■□□□ 1.45
Vps9d1Q8C190 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps9d1Q8C190 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps9d1Q8C190 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vps9d1Q8C190 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vps9d1Q8C190 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Vps9d1Q8C190 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Vps9d1Q8C190 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.06■■□□□ 1.44
Vps9d1Q8C190 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vps9d1Q8C190 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vps9d1Q8C190 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Vps9d1Q8C190 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps9d1Q8C190 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Vps9d1Q8C190 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps9d1Q8C190 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps9d1Q8C190 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vps9d1Q8C190 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.02■■□□□ 1.44
Vps9d1Q8C190 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps9d1Q8C190 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps9d1Q8C190 Mipep-204ENSMUST00000225043 1548 ntBASIC24■■□□□ 1.43
Vps9d1Q8C190 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
Vps9d1Q8C190 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Vps9d1Q8C190 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Vps9d1Q8C190 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Vps9d1Q8C190 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Vps9d1Q8C190 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Vps9d1Q8C190 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.91■■□□□ 1.42
Vps9d1Q8C190 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vps9d1Q8C190 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps9d1Q8C190 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps9d1Q8C190 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps9d1Q8C190 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps9d1Q8C190 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vps9d1Q8C190 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vps9d1Q8C190 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps9d1Q8C190 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps9d1Q8C190 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.83■■□□□ 1.4
Vps9d1Q8C190 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps9d1Q8C190 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps9d1Q8C190 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps9d1Q8C190 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps9d1Q8C190 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.79■■□□□ 1.4
Vps9d1Q8C190 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vps9d1Q8C190 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps9d1Q8C190 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vps9d1Q8C190 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vps9d1Q8C190 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Vps9d1Q8C190 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps9d1Q8C190 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.76■■□□□ 1.39
Vps9d1Q8C190 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.76■■□□□ 1.39
Vps9d1Q8C190 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vps9d1Q8C190 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Vps9d1Q8C190 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps9d1Q8C190 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.75■■□□□ 1.39
Vps9d1Q8C190 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Vps9d1Q8C190 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps9d1Q8C190 Gm27322-201ENSMUST00000184007 104 ntBASIC23.72■■□□□ 1.39
Vps9d1Q8C190 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps9d1Q8C190 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Vps9d1Q8C190 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Vps9d1Q8C190 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Vps9d1Q8C190 Zxda-201ENSMUST00000117281 2621 ntBASIC23.7■■□□□ 1.38
Vps9d1Q8C190 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.67■■□□□ 1.38
Vps9d1Q8C190 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps9d1Q8C190 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vps9d1Q8C190 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Vps9d1Q8C190 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
Vps9d1Q8C190 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
Vps9d1Q8C190 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vps9d1Q8C190 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps9d1Q8C190 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Vps9d1Q8C190 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps9d1Q8C190 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps9d1Q8C190 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.56■■□□□ 1.36
Vps9d1Q8C190 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Vps9d1Q8C190 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps9d1Q8C190 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps9d1Q8C190 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps9d1Q8C190 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Vps9d1Q8C190 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Vps9d1Q8C190 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vps9d1Q8C190 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps9d1Q8C190 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.49■■□□□ 1.35
Vps9d1Q8C190 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps9d1Q8C190 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps9d1Q8C190 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.48■■□□□ 1.35
Vps9d1Q8C190 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps9d1Q8C190 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps9d1Q8C190 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps9d1Q8C190 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vps9d1Q8C190 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Vps9d1Q8C190 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vps9d1Q8C190 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
Vps9d1Q8C190 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 271.5 ms