Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.56■■□□□ 1.52
Ppp1r3eQ8BRJ4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ppp1r3eQ8BRJ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ppp1r3eQ8BRJ4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ppp1r3eQ8BRJ4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ppp1r3eQ8BRJ4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppp1r3eQ8BRJ4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp1r3eQ8BRJ4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp1r3eQ8BRJ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppp1r3eQ8BRJ4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppp1r3eQ8BRJ4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.52■■□□□ 1.52
Ppp1r3eQ8BRJ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppp1r3eQ8BRJ4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ppp1r3eQ8BRJ4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.51■■□□□ 1.51
Ppp1r3eQ8BRJ4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Ppp1r3eQ8BRJ4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Ppp1r3eQ8BRJ4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ppp1r3eQ8BRJ4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ppp1r3eQ8BRJ4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ppp1r3eQ8BRJ4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Ppp1r3eQ8BRJ4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ppp1r3eQ8BRJ4 Zxda-201ENSMUST00000117281 2621 ntBASIC24.44■■□□□ 1.5
Ppp1r3eQ8BRJ4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ppp1r3eQ8BRJ4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ppp1r3eQ8BRJ4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ppp1r3eQ8BRJ4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp1r3eQ8BRJ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp1r3eQ8BRJ4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp1r3eQ8BRJ4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ppp1r3eQ8BRJ4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Ppp1r3eQ8BRJ4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppp1r3eQ8BRJ4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.36■■□□□ 1.49
Ppp1r3eQ8BRJ4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ppp1r3eQ8BRJ4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.35■■□□□ 1.49
Ppp1r3eQ8BRJ4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
Ppp1r3eQ8BRJ4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp1r3eQ8BRJ4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ppp1r3eQ8BRJ4 Mipep-204ENSMUST00000225043 1548 ntBASIC24.32■■□□□ 1.48
Ppp1r3eQ8BRJ4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ppp1r3eQ8BRJ4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ppp1r3eQ8BRJ4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ppp1r3eQ8BRJ4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ppp1r3eQ8BRJ4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ppp1r3eQ8BRJ4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.3■■□□□ 1.48
Ppp1r3eQ8BRJ4 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.3■■□□□ 1.48
Ppp1r3eQ8BRJ4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp1r3eQ8BRJ4 Gm26115-201ENSMUST00000175605 87 ntBASIC24.29■■□□□ 1.48
Ppp1r3eQ8BRJ4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.29■■□□□ 1.48
Ppp1r3eQ8BRJ4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ppp1r3eQ8BRJ4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ppp1r3eQ8BRJ4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Ppp1r3eQ8BRJ4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ppp1r3eQ8BRJ4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ppp1r3eQ8BRJ4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ppp1r3eQ8BRJ4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ppp1r3eQ8BRJ4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp1r3eQ8BRJ4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp1r3eQ8BRJ4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.21■■□□□ 1.47
Ppp1r3eQ8BRJ4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
Ppp1r3eQ8BRJ4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ppp1r3eQ8BRJ4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ppp1r3eQ8BRJ4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.19■■□□□ 1.46
Ppp1r3eQ8BRJ4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ppp1r3eQ8BRJ4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ppp1r3eQ8BRJ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp1r3eQ8BRJ4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ppp1r3eQ8BRJ4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ppp1r3eQ8BRJ4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ppp1r3eQ8BRJ4 Gm8109-201ENSMUST00000194076 746 ntBASIC24.13■■□□□ 1.45
Ppp1r3eQ8BRJ4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ppp1r3eQ8BRJ4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp1r3eQ8BRJ4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
Ppp1r3eQ8BRJ4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ppp1r3eQ8BRJ4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ppp1r3eQ8BRJ4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ppp1r3eQ8BRJ4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ppp1r3eQ8BRJ4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ppp1r3eQ8BRJ4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ppp1r3eQ8BRJ4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ppp1r3eQ8BRJ4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ppp1r3eQ8BRJ4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ppp1r3eQ8BRJ4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ppp1r3eQ8BRJ4 Amer2-203ENSMUST00000225247 2662 ntBASIC23.99■■□□□ 1.43
Ppp1r3eQ8BRJ4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
Ppp1r3eQ8BRJ4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ppp1r3eQ8BRJ4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ppp1r3eQ8BRJ4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ppp1r3eQ8BRJ4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ppp1r3eQ8BRJ4 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.92■■□□□ 1.42
Ppp1r3eQ8BRJ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ppp1r3eQ8BRJ4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ppp1r3eQ8BRJ4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ppp1r3eQ8BRJ4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ppp1r3eQ8BRJ4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ppp1r3eQ8BRJ4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms