Protein–RNA interactions for Protein: Q8BHC1

Rab39b, Ras-related protein Rab-39B, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39bQ8BHC1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rab39bQ8BHC1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rab39bQ8BHC1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rab39bQ8BHC1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rab39bQ8BHC1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rab39bQ8BHC1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rab39bQ8BHC1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rab39bQ8BHC1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rab39bQ8BHC1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.03■■□□□ 1.12
Rab39bQ8BHC1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab39bQ8BHC1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rab39bQ8BHC1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rab39bQ8BHC1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rab39bQ8BHC1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab39bQ8BHC1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab39bQ8BHC1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rab39bQ8BHC1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rab39bQ8BHC1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rab39bQ8BHC1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rab39bQ8BHC1 Mipep-204ENSMUST00000225043 1548 ntBASIC21.95■■□□□ 1.1
Rab39bQ8BHC1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab39bQ8BHC1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rab39bQ8BHC1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rab39bQ8BHC1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.93■■□□□ 1.1
Rab39bQ8BHC1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab39bQ8BHC1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rab39bQ8BHC1 Gm16148-201ENSMUST00000119653 893 ntBASIC21.9■■□□□ 1.1
Rab39bQ8BHC1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab39bQ8BHC1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rab39bQ8BHC1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Rab39bQ8BHC1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab39bQ8BHC1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab39bQ8BHC1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rab39bQ8BHC1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab39bQ8BHC1 Peli2-204ENSMUST00000226513 1320 ntBASIC21.82■■□□□ 1.08
Rab39bQ8BHC1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rab39bQ8BHC1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.81■■□□□ 1.08
Rab39bQ8BHC1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.81■■□□□ 1.08
Rab39bQ8BHC1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Rab39bQ8BHC1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rab39bQ8BHC1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rab39bQ8BHC1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rab39bQ8BHC1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Rab39bQ8BHC1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab39bQ8BHC1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rab39bQ8BHC1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab39bQ8BHC1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rab39bQ8BHC1 Zxda-201ENSMUST00000117281 2621 ntBASIC21.75■■□□□ 1.07
Rab39bQ8BHC1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rab39bQ8BHC1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rab39bQ8BHC1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rab39bQ8BHC1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Rab39bQ8BHC1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab39bQ8BHC1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rab39bQ8BHC1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.71■■□□□ 1.07
Rab39bQ8BHC1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.7■■□□□ 1.06
Rab39bQ8BHC1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.7■■□□□ 1.06
Rab39bQ8BHC1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rab39bQ8BHC1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rab39bQ8BHC1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rab39bQ8BHC1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rab39bQ8BHC1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab39bQ8BHC1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Rab39bQ8BHC1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab39bQ8BHC1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.65■■□□□ 1.06
Rab39bQ8BHC1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Rab39bQ8BHC1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab39bQ8BHC1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab39bQ8BHC1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab39bQ8BHC1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rab39bQ8BHC1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab39bQ8BHC1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.61■■□□□ 1.05
Rab39bQ8BHC1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rab39bQ8BHC1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab39bQ8BHC1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab39bQ8BHC1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rab39bQ8BHC1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rab39bQ8BHC1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.57■■□□□ 1.04
Rab39bQ8BHC1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rab39bQ8BHC1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab39bQ8BHC1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rab39bQ8BHC1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.56■■□□□ 1.04
Rab39bQ8BHC1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.56■■□□□ 1.04
Rab39bQ8BHC1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab39bQ8BHC1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab39bQ8BHC1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rab39bQ8BHC1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rab39bQ8BHC1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rab39bQ8BHC1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rab39bQ8BHC1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.5■■□□□ 1.03
Rab39bQ8BHC1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rab39bQ8BHC1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.48■■□□□ 1.03
Rab39bQ8BHC1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rab39bQ8BHC1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab39bQ8BHC1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39bQ8BHC1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39bQ8BHC1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39bQ8BHC1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39bQ8BHC1 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.45■■□□□ 1.02
Rab39bQ8BHC1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms