Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ssxb3Q6XAS4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.87■■□□□ 1.73
Ssxb3Q6XAS4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Ssxb3Q6XAS4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ssxb3Q6XAS4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.85■■□□□ 1.73
Ssxb3Q6XAS4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.85■■□□□ 1.73
Ssxb3Q6XAS4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Ssxb3Q6XAS4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ssxb3Q6XAS4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.82■■□□□ 1.72
Ssxb3Q6XAS4 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.8■■□□□ 1.72
Ssxb3Q6XAS4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Ssxb3Q6XAS4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ssxb3Q6XAS4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ssxb3Q6XAS4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Ssxb3Q6XAS4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.75■■□□□ 1.71
Ssxb3Q6XAS4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ssxb3Q6XAS4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ssxb3Q6XAS4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ssxb3Q6XAS4 Gm27322-201ENSMUST00000184007 104 ntBASIC25.74■■□□□ 1.71
Ssxb3Q6XAS4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ssxb3Q6XAS4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.73■■□□□ 1.71
Ssxb3Q6XAS4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Ssxb3Q6XAS4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ssxb3Q6XAS4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.7
Ssxb3Q6XAS4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ssxb3Q6XAS4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.68■■□□□ 1.7
Ssxb3Q6XAS4 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.68■■□□□ 1.7
Ssxb3Q6XAS4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ssxb3Q6XAS4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ssxb3Q6XAS4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ssxb3Q6XAS4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ssxb3Q6XAS4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ssxb3Q6XAS4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
Ssxb3Q6XAS4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ssxb3Q6XAS4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ssxb3Q6XAS4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ssxb3Q6XAS4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Ssxb3Q6XAS4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Ssxb3Q6XAS4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ssxb3Q6XAS4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.58■■□□□ 1.69
Ssxb3Q6XAS4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ssxb3Q6XAS4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ssxb3Q6XAS4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ssxb3Q6XAS4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ssxb3Q6XAS4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ssxb3Q6XAS4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Ssxb3Q6XAS4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ssxb3Q6XAS4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ssxb3Q6XAS4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ssxb3Q6XAS4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ssxb3Q6XAS4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ssxb3Q6XAS4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ssxb3Q6XAS4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ssxb3Q6XAS4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ssxb3Q6XAS4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ssxb3Q6XAS4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ssxb3Q6XAS4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ssxb3Q6XAS4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ssxb3Q6XAS4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ssxb3Q6XAS4 Gm26115-201ENSMUST00000175605 87 ntBASIC25.42■■□□□ 1.66
Ssxb3Q6XAS4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ssxb3Q6XAS4 Gm8109-201ENSMUST00000194076 746 ntBASIC25.4■■□□□ 1.66
Ssxb3Q6XAS4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ssxb3Q6XAS4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ssxb3Q6XAS4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ssxb3Q6XAS4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ssxb3Q6XAS4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ssxb3Q6XAS4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ssxb3Q6XAS4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ssxb3Q6XAS4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ssxb3Q6XAS4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ssxb3Q6XAS4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ssxb3Q6XAS4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.33■■□□□ 1.65
Ssxb3Q6XAS4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ssxb3Q6XAS4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ssxb3Q6XAS4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ssxb3Q6XAS4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ssxb3Q6XAS4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
Ssxb3Q6XAS4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ssxb3Q6XAS4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Ssxb3Q6XAS4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Ssxb3Q6XAS4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ssxb3Q6XAS4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ssxb3Q6XAS4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Zxda-201ENSMUST00000117281 2621 ntBASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ssxb3Q6XAS4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.2■■□□□ 1.63
Ssxb3Q6XAS4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ssxb3Q6XAS4 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.17■■□□□ 1.62
Ssxb3Q6XAS4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
Ssxb3Q6XAS4 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.16■■□□□ 1.62
Ssxb3Q6XAS4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Ssxb3Q6XAS4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.14■■□□□ 1.62
Ssxb3Q6XAS4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ssxb3Q6XAS4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.14■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms