Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga7Q6DD96 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga7Q6DD96 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga7Q6DD96 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhga7Q6DD96 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhga7Q6DD96 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhga7Q6DD96 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Pcdhga7Q6DD96 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhga7Q6DD96 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.17■■□□□ 1.62
Pcdhga7Q6DD96 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.17■■□□□ 1.62
Pcdhga7Q6DD96 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.15■■□□□ 1.62
Pcdhga7Q6DD96 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga7Q6DD96 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhga7Q6DD96 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhga7Q6DD96 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhga7Q6DD96 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Pcdhga7Q6DD96 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhga7Q6DD96 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga7Q6DD96 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga7Q6DD96 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhga7Q6DD96 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhga7Q6DD96 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhga7Q6DD96 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhga7Q6DD96 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.05■■□□□ 1.6
Pcdhga7Q6DD96 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhga7Q6DD96 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhga7Q6DD96 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhga7Q6DD96 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.03■■□□□ 1.6
Pcdhga7Q6DD96 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
Pcdhga7Q6DD96 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.03■■□□□ 1.6
Pcdhga7Q6DD96 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Pcdhga7Q6DD96 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhga7Q6DD96 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhga7Q6DD96 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.99■■□□□ 1.59
Pcdhga7Q6DD96 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.98■■□□□ 1.59
Pcdhga7Q6DD96 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga7Q6DD96 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga7Q6DD96 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhga7Q6DD96 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhga7Q6DD96 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Pcdhga7Q6DD96 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Pcdhga7Q6DD96 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga7Q6DD96 Gm27322-201ENSMUST00000184007 104 ntBASIC24.91■■□□□ 1.58
Pcdhga7Q6DD96 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
Pcdhga7Q6DD96 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga7Q6DD96 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhga7Q6DD96 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.89■■□□□ 1.58
Pcdhga7Q6DD96 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga7Q6DD96 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
Pcdhga7Q6DD96 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga7Q6DD96 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga7Q6DD96 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.85■■□□□ 1.57
Pcdhga7Q6DD96 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhga7Q6DD96 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.84■■□□□ 1.57
Pcdhga7Q6DD96 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga7Q6DD96 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga7Q6DD96 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Pcdhga7Q6DD96 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhga7Q6DD96 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhga7Q6DD96 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhga7Q6DD96 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhga7Q6DD96 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhga7Q6DD96 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga7Q6DD96 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga7Q6DD96 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga7Q6DD96 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga7Q6DD96 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga7Q6DD96 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga7Q6DD96 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.75■■□□□ 1.55
Pcdhga7Q6DD96 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhga7Q6DD96 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhga7Q6DD96 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhga7Q6DD96 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcdhga7Q6DD96 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhga7Q6DD96 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga7Q6DD96 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhga7Q6DD96 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Pcdhga7Q6DD96 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhga7Q6DD96 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga7Q6DD96 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Pcdhga7Q6DD96 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga7Q6DD96 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhga7Q6DD96 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga7Q6DD96 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga7Q6DD96 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga7Q6DD96 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga7Q6DD96 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhga7Q6DD96 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga7Q6DD96 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Pcdhga7Q6DD96 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhga7Q6DD96 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.55■■□□□ 1.52
Pcdhga7Q6DD96 Gm26115-201ENSMUST00000175605 87 ntBASIC24.55■■□□□ 1.52
Pcdhga7Q6DD96 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhga7Q6DD96 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhga7Q6DD96 Gm8109-201ENSMUST00000194076 746 ntBASIC24.54■■□□□ 1.52
Pcdhga7Q6DD96 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga7Q6DD96 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.53■■□□□ 1.52
Pcdhga7Q6DD96 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhga7Q6DD96 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhga7Q6DD96 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms