Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ss18Q62280 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ss18Q62280 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ss18Q62280 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ss18Q62280 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ss18Q62280 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ss18Q62280 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ss18Q62280 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.9■□□□□ 0.62
Ss18Q62280 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ss18Q62280 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ss18Q62280 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.87■□□□□ 0.61
Ss18Q62280 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ss18Q62280 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ss18Q62280 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ss18Q62280 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ss18Q62280 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.81■□□□□ 0.6
Ss18Q62280 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.81■□□□□ 0.6
Ss18Q62280 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ss18Q62280 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ss18Q62280 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ss18Q62280 Mipep-204ENSMUST00000225043 1548 ntBASIC18.79■□□□□ 0.6
Ss18Q62280 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ss18Q62280 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ss18Q62280 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ss18Q62280 Zxda-201ENSMUST00000117281 2621 ntBASIC18.77■□□□□ 0.6
Ss18Q62280 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ss18Q62280 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ss18Q62280 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.74■□□□□ 0.59
Ss18Q62280 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ss18Q62280 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ss18Q62280 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ss18Q62280 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ss18Q62280 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ss18Q62280 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.7■□□□□ 0.58
Ss18Q62280 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ss18Q62280 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.69■□□□□ 0.58
Ss18Q62280 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ss18Q62280 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ss18Q62280 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ss18Q62280 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ss18Q62280 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ss18Q62280 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ss18Q62280 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.65■□□□□ 0.58
Ss18Q62280 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ss18Q62280 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ss18Q62280 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.64■□□□□ 0.57
Ss18Q62280 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.64■□□□□ 0.57
Ss18Q62280 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ss18Q62280 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ss18Q62280 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ss18Q62280 Gm27322-201ENSMUST00000184007 104 ntBASIC18.6■□□□□ 0.57
Ss18Q62280 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ss18Q62280 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ss18Q62280 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ss18Q62280 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.58■□□□□ 0.56
Ss18Q62280 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ss18Q62280 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.57■□□□□ 0.56
Ss18Q62280 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ss18Q62280 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ss18Q62280 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ss18Q62280 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ss18Q62280 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.56■□□□□ 0.56
Ss18Q62280 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.55■□□□□ 0.56
Ss18Q62280 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ss18Q62280 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ss18Q62280 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ss18Q62280 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ss18Q62280 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ss18Q62280 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ss18Q62280 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ss18Q62280 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.53■□□□□ 0.56
Ss18Q62280 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ss18Q62280 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ss18Q62280 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.52■□□□□ 0.56
Ss18Q62280 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ss18Q62280 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ss18Q62280 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ss18Q62280 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ss18Q62280 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Ss18Q62280 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.49■□□□□ 0.55
Ss18Q62280 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ss18Q62280 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ss18Q62280 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ss18Q62280 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ss18Q62280 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.47■□□□□ 0.55
Ss18Q62280 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ss18Q62280 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ss18Q62280 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ss18Q62280 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ss18Q62280 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ss18Q62280 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ss18Q62280 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ss18Q62280 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ss18Q62280 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ss18Q62280 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ss18Q62280 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ss18Q62280 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Ss18Q62280 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ss18Q62280 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ss18Q62280 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms