Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Foxc2Q61850 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Foxc2Q61850 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Foxc2Q61850 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Foxc2Q61850 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxc2Q61850 Gm24804-201ENSMUST00000174982 85 ntBASIC20.21■□□□□ 0.83
Foxc2Q61850 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Foxc2Q61850 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Foxc2Q61850 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Foxc2Q61850 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Foxc2Q61850 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Foxc2Q61850 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxc2Q61850 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Foxc2Q61850 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxc2Q61850 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Foxc2Q61850 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Foxc2Q61850 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Foxc2Q61850 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Foxc2Q61850 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Foxc2Q61850 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxc2Q61850 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Foxc2Q61850 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.11■□□□□ 0.81
Foxc2Q61850 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Foxc2Q61850 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Foxc2Q61850 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Foxc2Q61850 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Foxc2Q61850 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Foxc2Q61850 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.04■□□□□ 0.8
Foxc2Q61850 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Foxc2Q61850 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Foxc2Q61850 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Foxc2Q61850 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxc2Q61850 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20■□□□□ 0.79
Foxc2Q61850 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Foxc2Q61850 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Foxc2Q61850 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Foxc2Q61850 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxc2Q61850 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Foxc2Q61850 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Foxc2Q61850 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Foxc2Q61850 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxc2Q61850 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Foxc2Q61850 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.94■□□□□ 0.78
Foxc2Q61850 Peli2-204ENSMUST00000226513 1320 ntBASIC19.94■□□□□ 0.78
Foxc2Q61850 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Foxc2Q61850 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Foxc2Q61850 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxc2Q61850 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxc2Q61850 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Foxc2Q61850 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Foxc2Q61850 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Foxc2Q61850 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
Foxc2Q61850 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.91■□□□□ 0.78
Foxc2Q61850 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Foxc2Q61850 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.88■□□□□ 0.77
Foxc2Q61850 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Foxc2Q61850 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxc2Q61850 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Foxc2Q61850 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Foxc2Q61850 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxc2Q61850 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Foxc2Q61850 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Foxc2Q61850 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxc2Q61850 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Foxc2Q61850 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.83■□□□□ 0.76
Foxc2Q61850 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.83■□□□□ 0.76
Foxc2Q61850 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Foxc2Q61850 Gm16148-201ENSMUST00000119653 893 ntBASIC19.82■□□□□ 0.76
Foxc2Q61850 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxc2Q61850 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxc2Q61850 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxc2Q61850 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Foxc2Q61850 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Foxc2Q61850 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.75■□□□□ 0.75
Foxc2Q61850 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxc2Q61850 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Foxc2Q61850 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.73■□□□□ 0.75
Foxc2Q61850 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxc2Q61850 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxc2Q61850 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.72■□□□□ 0.75
Foxc2Q61850 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxc2Q61850 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Foxc2Q61850 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Foxc2Q61850 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxc2Q61850 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Foxc2Q61850 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxc2Q61850 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxc2Q61850 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxc2Q61850 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxc2Q61850 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxc2Q61850 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.65■□□□□ 0.74
Foxc2Q61850 Zfp131-205ENSMUST00000223812 663 ntBASIC19.65■□□□□ 0.74
Foxc2Q61850 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxc2Q61850 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Foxc2Q61850 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxc2Q61850 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Foxc2Q61850 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxc2Q61850 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Foxc2Q61850 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxc2Q61850 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms