Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SgcbP82349 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.32■■□□□ 1.32
SgcbP82349 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SgcbP82349 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SgcbP82349 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SgcbP82349 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SgcbP82349 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SgcbP82349 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SgcbP82349 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SgcbP82349 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SgcbP82349 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SgcbP82349 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SgcbP82349 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SgcbP82349 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SgcbP82349 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SgcbP82349 Peli2-204ENSMUST00000226513 1320 ntBASIC23.18■■□□□ 1.3
SgcbP82349 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SgcbP82349 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SgcbP82349 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.16■■□□□ 1.3
SgcbP82349 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.15■■□□□ 1.3
SgcbP82349 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.15■■□□□ 1.3
SgcbP82349 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SgcbP82349 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SgcbP82349 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SgcbP82349 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SgcbP82349 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SgcbP82349 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SgcbP82349 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SgcbP82349 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SgcbP82349 Gm16148-201ENSMUST00000119653 893 ntBASIC23.08■■□□□ 1.29
SgcbP82349 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SgcbP82349 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SgcbP82349 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
SgcbP82349 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.06■■□□□ 1.28
SgcbP82349 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SgcbP82349 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SgcbP82349 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SgcbP82349 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SgcbP82349 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SgcbP82349 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SgcbP82349 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
SgcbP82349 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SgcbP82349 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SgcbP82349 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SgcbP82349 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SgcbP82349 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.91■■□□□ 1.26
SgcbP82349 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SgcbP82349 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SgcbP82349 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SgcbP82349 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SgcbP82349 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SgcbP82349 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.87■■□□□ 1.25
SgcbP82349 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SgcbP82349 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SgcbP82349 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SgcbP82349 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SgcbP82349 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SgcbP82349 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SgcbP82349 Zfp131-205ENSMUST00000223812 663 ntBASIC22.83■■□□□ 1.25
SgcbP82349 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.82■■□□□ 1.24
SgcbP82349 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SgcbP82349 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.8■■□□□ 1.24
SgcbP82349 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SgcbP82349 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SgcbP82349 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
SgcbP82349 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SgcbP82349 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SgcbP82349 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.78■■□□□ 1.24
SgcbP82349 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
SgcbP82349 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SgcbP82349 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SgcbP82349 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SgcbP82349 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SgcbP82349 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SgcbP82349 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
SgcbP82349 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.74■■□□□ 1.23
SgcbP82349 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
SgcbP82349 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SgcbP82349 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.73■■□□□ 1.23
SgcbP82349 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.72■■□□□ 1.23
SgcbP82349 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SgcbP82349 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SgcbP82349 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.7■■□□□ 1.22
SgcbP82349 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.7■■□□□ 1.22
SgcbP82349 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SgcbP82349 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SgcbP82349 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.67■■□□□ 1.22
SgcbP82349 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SgcbP82349 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SgcbP82349 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SgcbP82349 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SgcbP82349 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SgcbP82349 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SgcbP82349 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
SgcbP82349 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SgcbP82349 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SgcbP82349 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SgcbP82349 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SgcbP82349 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SgcbP82349 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms