Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
ThraP63058 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ThraP63058 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ThraP63058 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ThraP63058 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ThraP63058 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ThraP63058 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ThraP63058 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ThraP63058 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
ThraP63058 Zfp131-205ENSMUST00000223812 663 ntBASIC26.14■■□□□ 1.78
ThraP63058 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ThraP63058 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ThraP63058 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ThraP63058 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.06■■□□□ 1.76
ThraP63058 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.04■■□□□ 1.76
ThraP63058 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.03■■□□□ 1.76
ThraP63058 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ThraP63058 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ThraP63058 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ThraP63058 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ThraP63058 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
ThraP63058 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ThraP63058 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ThraP63058 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
ThraP63058 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.88■■□□□ 1.73
ThraP63058 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ThraP63058 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ThraP63058 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
ThraP63058 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ThraP63058 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ThraP63058 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ThraP63058 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ThraP63058 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
ThraP63058 Gm16148-201ENSMUST00000119653 893 ntBASIC25.82■■□□□ 1.72
ThraP63058 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.82■■□□□ 1.72
ThraP63058 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.82■■□□□ 1.72
ThraP63058 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ThraP63058 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ThraP63058 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ThraP63058 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
ThraP63058 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ThraP63058 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ThraP63058 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ThraP63058 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ThraP63058 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ThraP63058 Peli2-204ENSMUST00000226513 1320 ntBASIC25.75■■□□□ 1.71
ThraP63058 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ThraP63058 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ThraP63058 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ThraP63058 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ThraP63058 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ThraP63058 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ThraP63058 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
ThraP63058 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ThraP63058 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.69■■□□□ 1.7
ThraP63058 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ThraP63058 Mipep-204ENSMUST00000225043 1548 ntBASIC25.68■■□□□ 1.7
ThraP63058 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ThraP63058 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ThraP63058 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ThraP63058 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ThraP63058 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ThraP63058 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
ThraP63058 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ThraP63058 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ThraP63058 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.59■■□□□ 1.69
ThraP63058 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ThraP63058 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ThraP63058 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.58■■□□□ 1.69
ThraP63058 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ThraP63058 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ThraP63058 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ThraP63058 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
ThraP63058 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ThraP63058 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.52■■□□□ 1.68
ThraP63058 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
ThraP63058 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.49■■□□□ 1.67
ThraP63058 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ThraP63058 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ThraP63058 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ThraP63058 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ThraP63058 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.48■■□□□ 1.67
ThraP63058 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ThraP63058 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.45■■□□□ 1.66
ThraP63058 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ThraP63058 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ThraP63058 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ThraP63058 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ThraP63058 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ThraP63058 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ThraP63058 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.42■■□□□ 1.66
ThraP63058 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ThraP63058 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.41■■□□□ 1.66
ThraP63058 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ThraP63058 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ThraP63058 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ThraP63058 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
ThraP63058 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ThraP63058 Zxda-201ENSMUST00000117281 2621 ntBASIC25.38■■□□□ 1.65
ThraP63058 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms