Protein–RNA interactions for Protein: P62320

Snrpd3, Small nuclear ribonucleoprotein Sm D3, mousemouse

Known RBP Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpd3P62320 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Snrpd3P62320 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Snrpd3P62320 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snrpd3P62320 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd3P62320 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.7■□□□□ 0.74
Snrpd3P62320 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.69■□□□□ 0.74
Snrpd3P62320 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd3P62320 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.67■□□□□ 0.74
Snrpd3P62320 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.65■□□□□ 0.74
Snrpd3P62320 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Snrpd3P62320 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd3P62320 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.64■□□□□ 0.73
Snrpd3P62320 Gm8109-201ENSMUST00000194076 746 ntBASIC19.62■□□□□ 0.73
Snrpd3P62320 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.61■□□□□ 0.73
Snrpd3P62320 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Snrpd3P62320 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snrpd3P62320 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Snrpd3P62320 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.57■□□□□ 0.72
Snrpd3P62320 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Snrpd3P62320 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Snrpd3P62320 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Snrpd3P62320 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Snrpd3P62320 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Snrpd3P62320 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Snrpd3P62320 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Snrpd3P62320 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Snrpd3P62320 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snrpd3P62320 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snrpd3P62320 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snrpd3P62320 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snrpd3P62320 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrpd3P62320 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrpd3P62320 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrpd3P62320 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snrpd3P62320 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrpd3P62320 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snrpd3P62320 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snrpd3P62320 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snrpd3P62320 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snrpd3P62320 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snrpd3P62320 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Snrpd3P62320 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snrpd3P62320 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Snrpd3P62320 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.35■□□□□ 0.69
Snrpd3P62320 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snrpd3P62320 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snrpd3P62320 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snrpd3P62320 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snrpd3P62320 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snrpd3P62320 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snrpd3P62320 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snrpd3P62320 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snrpd3P62320 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snrpd3P62320 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snrpd3P62320 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Snrpd3P62320 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snrpd3P62320 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snrpd3P62320 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snrpd3P62320 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snrpd3P62320 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Snrpd3P62320 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snrpd3P62320 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.27■□□□□ 0.68
Snrpd3P62320 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Snrpd3P62320 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snrpd3P62320 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snrpd3P62320 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snrpd3P62320 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snrpd3P62320 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.22■□□□□ 0.67
Snrpd3P62320 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrpd3P62320 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrpd3P62320 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snrpd3P62320 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snrpd3P62320 Peli2-204ENSMUST00000226513 1320 ntBASIC19.19■□□□□ 0.66
Snrpd3P62320 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snrpd3P62320 Gm24804-201ENSMUST00000174982 85 ntBASIC19.18■□□□□ 0.66
Snrpd3P62320 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snrpd3P62320 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrpd3P62320 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snrpd3P62320 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrpd3P62320 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snrpd3P62320 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.15■□□□□ 0.66
Snrpd3P62320 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Snrpd3P62320 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snrpd3P62320 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Snrpd3P62320 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.13■□□□□ 0.65
Snrpd3P62320 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snrpd3P62320 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snrpd3P62320 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snrpd3P62320 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Snrpd3P62320 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Snrpd3P62320 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Snrpd3P62320 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrpd3P62320 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.1■□□□□ 0.65
Snrpd3P62320 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Snrpd3P62320 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.09■□□□□ 0.65
Snrpd3P62320 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.09■□□□□ 0.65
Snrpd3P62320 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Snrpd3P62320 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Snrpd3P62320 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Snrpd3P62320 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms