Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YLL053CYLL053C 459 nt12.81□□□□□ -0.36
VPS4P52917 AQY1YPR192W 918 nt12.81□□□□□ -0.36
VPS4P52917 YLR415CYLR415C 339 nt12.8□□□□□ -0.36
VPS4P52917 FTR1YER145C 1215 nt12.78□□□□□ -0.36
VPS4P52917 GAL1YBR020W 1587 nt12.76□□□□□ -0.37
VPS4P52917 BIO4YNR057C 714 nt12.73□□□□□ -0.37
VPS4P52917 VPS75YNL246W 795 nt12.7□□□□□ -0.38
VPS4P52917 GLR1YPL091W 1452 nt12.7□□□□□ -0.38
VPS4P52917 CCT4YDL143W 1587 nt12.69□□□□□ -0.38
VPS4P52917 TRM5YHR070W 1500 nt12.68□□□□□ -0.38
VPS4P52917 SPC25YER018C 666 nt12.68□□□□□ -0.38
VPS4P52917 STB1YNL309W 1263 nt12.68□□□□□ -0.38
VPS4P52917 DAT1YML113W 747 nt12.67□□□□□ -0.38
VPS4P52917 YNL195CYNL195C 786 nt12.64□□□□□ -0.39
VPS4P52917 RRT12YCR045C 1476 nt12.64□□□□□ -0.39
VPS4P52917 RBG2YGR173W 1107 nt12.62□□□□□ -0.39
VPS4P52917 YDR524C-BYDR524C-B 201 nt12.6□□□□□ -0.39
VPS4P52917 SIM1YIL123W 1431 nt12.6□□□□□ -0.39
VPS4P52917 GUT2YIL155C 1950 nt12.6□□□□□ -0.39
VPS4P52917 VPS60YDR486C 690 nt12.59□□□□□ -0.39
VPS4P52917 YGL034CYGL034C 366 nt12.59□□□□□ -0.39
VPS4P52917 GPI16YHR188C 1833 nt12.58□□□□□ -0.4
VPS4P52917 ALG3YBL082C 1377 nt12.56□□□□□ -0.4
VPS4P52917 Q0182Q0182 405 nt12.56□□□□□ -0.4
VPS4P52917 SWC5YBR231C 912 nt12.56□□□□□ -0.4
VPS4P52917 ATF2YGR177C 1608 nt12.55□□□□□ -0.4
VPS4P52917 SPT8YLR055C 1809 nt12.55□□□□□ -0.4
VPS4P52917 YHL050CYHL050C 2094 nt12.52□□□□□ -0.4
VPS4P52917 PCH2YBR186W 1695 nt12.52□□□□□ -0.4
VPS4P52917 UBA4YHR111W 1323 nt12.51□□□□□ -0.41
VPS4P52917 DDR2YOL052C-A 186 nt12.5□□□□□ -0.41
VPS4P52917 MCH5YOR306C 1566 nt12.49□□□□□ -0.41
VPS4P52917 NDI1YML120C 1542 nt12.47□□□□□ -0.41
VPS4P52917 YFL067WYFL067W 528 nt12.47□□□□□ -0.41
VPS4P52917 BOR1YNL275W 1731 nt12.47□□□□□ -0.41
VPS4P52917 PAU7YAR020C 168 nt12.46□□□□□ -0.41
VPS4P52917 FEN2YCR028C 1539 nt12.46□□□□□ -0.42
VPS4P52917 YDL086C-AYDL086C-A 435 nt12.45□□□□□ -0.42
VPS4P52917 SHB17YKR043C 816 nt12.43□□□□□ -0.42
VPS4P52917 ANP1YEL036C 1503 nt12.42□□□□□ -0.42
VPS4P52917 YSR3YKR053C 1215 nt12.42□□□□□ -0.42
VPS4P52917 ERF2YLR246W 1080 nt12.42□□□□□ -0.42
VPS4P52917 RBG1YAL036C 1110 nt12.4□□□□□ -0.42
VPS4P52917 XYL2YLR070C 1071 nt12.4□□□□□ -0.42
VPS4P52917 CRR1YLR213C 1269 nt12.4□□□□□ -0.42
VPS4P52917 YDR010CYDR010C 333 nt12.35□□□□□ -0.43
VPS4P52917 SEC11YIR022W 504 nt12.35□□□□□ -0.43
VPS4P52917 TIM17YJL143W 477 nt12.34□□□□□ -0.43
VPS4P52917 YIR016WYIR016W 798 nt12.32□□□□□ -0.44
VPS4P52917 SAM1YLR180W 1149 nt12.32□□□□□ -0.44
VPS4P52917 SNG1YGR197C 1644 nt12.32□□□□□ -0.44
VPS4P52917 PIB2YGL023C 1908 nt12.31□□□□□ -0.44
VPS4P52917 YMR226CYMR226C 804 nt12.3□□□□□ -0.44
VPS4P52917 RAD51YER095W 1203 nt12.29□□□□□ -0.44
VPS4P52917 SHM2YLR058C 1410 nt12.28□□□□□ -0.44
VPS4P52917 MIC10YCL057C-A 294 nt12.25□□□□□ -0.45
VPS4P52917 RET2YFR051C 1641 nt12.24□□□□□ -0.45
VPS4P52917 AIM45YPR004C 1035 nt12.24□□□□□ -0.45
VPS4P52917 HEM12YDR047W 1089 nt12.23□□□□□ -0.45
VPS4P52917 YCR087WYCR087W 516 nt12.22□□□□□ -0.45
VPS4P52917 PHO89YBR296C 1725 nt12.22□□□□□ -0.45
VPS4P52917 SGT2YOR007C 1041 nt12.21□□□□□ -0.45
VPS4P52917 NIT1YIL164C 600 nt12.2□□□□□ -0.46
VPS4P52917 LYS4YDR234W 2082 nt12.2□□□□□ -0.46
VPS4P52917 NCP1YHR042W 2076 nt12.2□□□□□ -0.46
VPS4P52917 RPM1RPM1 483 nt12.17□□□□□ -0.46
VPS4P52917 XDJ1YLR090W 1380 nt12.17□□□□□ -0.46
VPS4P52917 COQ2YNR041C 1119 nt12.07□□□□□ -0.48
VPS4P52917 BOP3YNL042W 1191 nt12.05□□□□□ -0.48
VPS4P52917 MRP20YDR405W 792 nt12.04□□□□□ -0.48
VPS4P52917 YLR111WYLR111W 333 nt12.04□□□□□ -0.48
VPS4P52917 YNR029CYNR029C 1290 nt12.04□□□□□ -0.48
VPS4P52917 GDH3YAL062W 1374 nt12.04□□□□□ -0.48
VPS4P52917 RTF1YGL244W 1677 nt12.03□□□□□ -0.48
VPS4P52917 MIC12YBR262C 321 nt12.02□□□□□ -0.49
VPS4P52917 YLR349WYLR349W 507 nt12.01□□□□□ -0.49
VPS4P52917 ALG12YNR030W 1656 nt12□□□□□ -0.49
VPS4P52917 STE4YOR212W 1272 nt11.98□□□□□ -0.49
VPS4P52917 SFA1YDL168W 1161 nt11.96□□□□□ -0.49
VPS4P52917 BNA2YJR078W 1362 nt11.94□□□□□ -0.5
VPS4P52917 YHR056W-AYHR056W-A 435 nt11.93□□□□□ -0.5
VPS4P52917 YLR437C-AYLR437C-A 228 nt11.93□□□□□ -0.5
VPS4P52917 CAB5YDR196C 726 nt11.92□□□□□ -0.5
VPS4P52917 YGR201CYGR201C 678 nt11.9□□□□□ -0.5
VPS4P52917 PTK1YKL198C 1989 nt11.89□□□□□ -0.51
VPS4P52917 RPL4BYDR012W 1089 nt11.88□□□□□ -0.51
VPS4P52917 RPL4AYBR031W 1089 nt11.88□□□□□ -0.51
VPS4P52917 RAD23YEL037C 1197 nt11.87□□□□□ -0.51
VPS4P52917 RPS14BYJL191W 417 nt11.86□□□□□ -0.51
VPS4P52917 ADH7YCR105W 1086 nt11.84□□□□□ -0.51
VPS4P52917 YHL019W-AYHL019W-A 594 nt11.84□□□□□ -0.51
VPS4P52917 SDH5YOL071W 489 nt11.84□□□□□ -0.51
VPS4P52917 FUN14YAL008W 597 nt11.83□□□□□ -0.52
VPS4P52917 HHO1YPL127C 777 nt11.83□□□□□ -0.52
VPS4P52917 AVT6YER119C 1347 nt11.83□□□□□ -0.52
VPS4P52917 RAX1YOR301W 1308 nt11.81□□□□□ -0.52
VPS4P52917 PAU15YIR041W 375 nt11.8□□□□□ -0.52
VPS4P52917 YLR279WYLR279W 390 nt11.8□□□□□ -0.52
VPS4P52917 YCR102CYCR102C 1107 nt11.78□□□□□ -0.52
VPS4P52917 CLB6YGR109C 1143 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms