Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Nek1P51954 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Nek1P51954 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Nek1P51954 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Nek1P51954 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Nek1P51954 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Nek1P51954 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
Nek1P51954 Gm27322-201ENSMUST00000184007 104 ntBASIC29.1■■■□□ 2.25
Nek1P51954 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Nek1P51954 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Nek1P51954 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Nek1P51954 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.08■■■□□ 2.25
Nek1P51954 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Nek1P51954 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Nek1P51954 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Nek1P51954 Gm24804-201ENSMUST00000174982 85 ntBASIC29.02■■■□□ 2.24
Nek1P51954 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Nek1P51954 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
Nek1P51954 Mipep-204ENSMUST00000225043 1548 ntBASIC29■■■□□ 2.23
Nek1P51954 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29■■■□□ 2.23
Nek1P51954 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Nek1P51954 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29■■■□□ 2.23
Nek1P51954 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Nek1P51954 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Nek1P51954 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Nek1P51954 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Nek1P51954 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.91■■■□□ 2.22
Nek1P51954 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Nek1P51954 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Nek1P51954 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Nek1P51954 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
Nek1P51954 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Nek1P51954 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.86■■■□□ 2.21
Nek1P51954 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Nek1P51954 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Nek1P51954 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.85■■■□□ 2.21
Nek1P51954 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Nek1P51954 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Nek1P51954 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Nek1P51954 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.2
Nek1P51954 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Nek1P51954 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Nek1P51954 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Nek1P51954 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Nek1P51954 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Nek1P51954 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Nek1P51954 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Nek1P51954 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Nek1P51954 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Nek1P51954 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Nek1P51954 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Nek1P51954 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.63■■■□□ 2.17
Nek1P51954 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Nek1P51954 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Nek1P51954 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Nek1P51954 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Nek1P51954 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.6■■■□□ 2.17
Nek1P51954 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.59■■■□□ 2.17
Nek1P51954 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Nek1P51954 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Nek1P51954 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
Nek1P51954 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Nek1P51954 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Nek1P51954 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Nek1P51954 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.53■■■□□ 2.16
Nek1P51954 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Nek1P51954 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
Nek1P51954 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Nek1P51954 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Nek1P51954 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Nek1P51954 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Nek1P51954 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Nek1P51954 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.48■■■□□ 2.15
Nek1P51954 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.47■■■□□ 2.15
Nek1P51954 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Nek1P51954 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.47■■■□□ 2.15
Nek1P51954 Zxda-201ENSMUST00000117281 2621 ntBASIC28.46■■■□□ 2.15
Nek1P51954 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Nek1P51954 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Nek1P51954 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Nek1P51954 Zfp131-205ENSMUST00000223812 663 ntBASIC28.43■■■□□ 2.14
Nek1P51954 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Nek1P51954 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Nek1P51954 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Nek1P51954 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.41■■■□□ 2.14
Nek1P51954 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Nek1P51954 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Nek1P51954 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Nek1P51954 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Nek1P51954 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Nek1P51954 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.37■■■□□ 2.13
Nek1P51954 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Nek1P51954 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Nek1P51954 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Nek1P51954 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Nek1P51954 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Nek1P51954 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Nek1P51954 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Nek1P51954 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Nek1P51954 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.29■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms