Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Gm24804-201ENSMUST00000174982 85 ntBASIC21.11■□□□□ 0.97
Rplp1P47955 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rplp1P47955 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rplp1P47955 Mipep-204ENSMUST00000225043 1548 ntBASIC21.07■□□□□ 0.96
Rplp1P47955 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rplp1P47955 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rplp1P47955 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rplp1P47955 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rplp1P47955 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.02■□□□□ 0.96
Rplp1P47955 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.02■□□□□ 0.96
Rplp1P47955 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rplp1P47955 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rplp1P47955 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rplp1P47955 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rplp1P47955 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rplp1P47955 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rplp1P47955 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rplp1P47955 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rplp1P47955 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rplp1P47955 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rplp1P47955 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rplp1P47955 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rplp1P47955 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rplp1P47955 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rplp1P47955 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rplp1P47955 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rplp1P47955 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rplp1P47955 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rplp1P47955 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rplp1P47955 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rplp1P47955 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.84■□□□□ 0.93
Rplp1P47955 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rplp1P47955 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rplp1P47955 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rplp1P47955 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rplp1P47955 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.81■□□□□ 0.92
Rplp1P47955 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rplp1P47955 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rplp1P47955 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rplp1P47955 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rplp1P47955 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rplp1P47955 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Rplp1P47955 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rplp1P47955 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rplp1P47955 Peli2-204ENSMUST00000226513 1320 ntBASIC20.77■□□□□ 0.91
Rplp1P47955 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rplp1P47955 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rplp1P47955 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rplp1P47955 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.75■□□□□ 0.91
Rplp1P47955 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rplp1P47955 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rplp1P47955 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rplp1P47955 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rplp1P47955 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rplp1P47955 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rplp1P47955 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rplp1P47955 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rplp1P47955 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rplp1P47955 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rplp1P47955 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rplp1P47955 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.68■□□□□ 0.9
Rplp1P47955 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rplp1P47955 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rplp1P47955 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rplp1P47955 Gm16148-201ENSMUST00000119653 893 ntBASIC20.66■□□□□ 0.9
Rplp1P47955 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.64■□□□□ 0.9
Rplp1P47955 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rplp1P47955 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rplp1P47955 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rplp1P47955 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rplp1P47955 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rplp1P47955 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rplp1P47955 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rplp1P47955 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rplp1P47955 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rplp1P47955 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rplp1P47955 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rplp1P47955 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rplp1P47955 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rplp1P47955 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rplp1P47955 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rplp1P47955 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Rplp1P47955 Zfp131-205ENSMUST00000223812 663 ntBASIC20.53■□□□□ 0.88
Rplp1P47955 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rplp1P47955 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rplp1P47955 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rplp1P47955 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rplp1P47955 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rplp1P47955 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rplp1P47955 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.5■□□□□ 0.87
Rplp1P47955 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rplp1P47955 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rplp1P47955 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.48■□□□□ 0.87
Rplp1P47955 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rplp1P47955 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rplp1P47955 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.46■□□□□ 0.87
Rplp1P47955 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rplp1P47955 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rplp1P47955 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rplp1P47955 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms