Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 WSC2YNL283C 1512 nt8.67□□□□□ -1.02
VPS55P47111 TRM5YHR070W 1500 nt8.66□□□□□ -1.02
VPS55P47111 YFL067WYFL067W 528 nt8.66□□□□□ -1.02
VPS55P47111 YDR094WYDR094W 336 nt8.65□□□□□ -1.02
VPS55P47111 CRR1YLR213C 1269 nt8.65□□□□□ -1.02
VPS55P47111 BOR1YNL275W 1731 nt8.64□□□□□ -1.03
VPS55P47111 UBX6YJL048C 1191 nt8.64□□□□□ -1.03
VPS55P47111 DDR2YOL052C-A 186 nt8.64□□□□□ -1.03
VPS55P47111 ATF2YGR177C 1608 nt8.64□□□□□ -1.03
VPS55P47111 STB1YNL309W 1263 nt8.62□□□□□ -1.03
VPS55P47111 SPC25YER018C 666 nt8.61□□□□□ -1.03
VPS55P47111 LYS4YDR234W 2082 nt8.59□□□□□ -1.03
VPS55P47111 YDL086C-AYDL086C-A 435 nt8.59□□□□□ -1.03
VPS55P47111 YDR524C-BYDR524C-B 201 nt8.59□□□□□ -1.03
VPS55P47111 GPI16YHR188C 1833 nt8.59□□□□□ -1.03
VPS55P47111 HEM12YDR047W 1089 nt8.57□□□□□ -1.04
VPS55P47111 CCT4YDL143W 1587 nt8.56□□□□□ -1.04
VPS55P47111 PTK1YKL198C 1989 nt8.55□□□□□ -1.04
VPS55P47111 YFR018CYFR018C 1092 nt8.55□□□□□ -1.04
VPS55P47111 ANP1YEL036C 1503 nt8.54□□□□□ -1.04
VPS55P47111 SNG1YGR197C 1644 nt8.54□□□□□ -1.04
VPS55P47111 SWC5YBR231C 912 nt8.53□□□□□ -1.04
VPS55P47111 MCH5YOR306C 1566 nt8.52□□□□□ -1.04
VPS55P47111 YLR415CYLR415C 339 nt8.52□□□□□ -1.05
VPS55P47111 FEN2YCR028C 1539 nt8.52□□□□□ -1.05
VPS55P47111 VPS60YDR486C 690 nt8.51□□□□□ -1.05
VPS55P47111 BDH1YAL060W 1149 nt8.51□□□□□ -1.05
VPS55P47111 MIC10YCL057C-A 294 nt8.51□□□□□ -1.05
VPS55P47111 YSP3YOR003W 1437 nt8.47□□□□□ -1.05
VPS55P47111 RRT5YFR032C 870 nt8.47□□□□□ -1.05
VPS55P47111 PEX25YPL112C 1185 nt8.46□□□□□ -1.06
VPS55P47111 ALG3YBL082C 1377 nt8.46□□□□□ -1.06
VPS55P47111 YHR056W-AYHR056W-A 435 nt8.45□□□□□ -1.06
VPS55P47111 YFL054CYFL054C 1941 nt8.44□□□□□ -1.06
VPS55P47111 YIR016WYIR016W 798 nt8.44□□□□□ -1.06
VPS55P47111 PAU16YKL224C 372 nt8.42□□□□□ -1.06
VPS55P47111 PRE6YOL038W 765 nt8.42□□□□□ -1.06
VPS55P47111 BNA2YJR078W 1362 nt8.42□□□□□ -1.06
VPS55P47111 YNL115CYNL115C 1935 nt8.42□□□□□ -1.06
VPS55P47111 RAX1YOR301W 1308 nt8.41□□□□□ -1.06
VPS55P47111 YFL066CYFL066C 1179 nt8.4□□□□□ -1.06
VPS55P47111 SPT8YLR055C 1809 nt8.38□□□□□ -1.07
VPS55P47111 YFL015W-AYFL015W-A 318 nt8.38□□□□□ -1.07
VPS55P47111 MIC12YBR262C 321 nt8.37□□□□□ -1.07
VPS55P47111 ALG12YNR030W 1656 nt8.37□□□□□ -1.07
VPS55P47111 VPS75YNL246W 795 nt8.35□□□□□ -1.07
VPS55P47111 TIM17YJL143W 477 nt8.34□□□□□ -1.07
VPS55P47111 YGR201CYGR201C 678 nt8.3□□□□□ -1.08
VPS55P47111 HHO1YPL127C 777 nt8.3□□□□□ -1.08
VPS55P47111 XDJ1YLR090W 1380 nt8.3□□□□□ -1.08
VPS55P47111 SHM2YLR058C 1410 nt8.28□□□□□ -1.08
VPS55P47111 HSP60YLR259C 1719 nt8.27□□□□□ -1.09
VPS55P47111 GLK1YCL040W 1503 nt8.27□□□□□ -1.09
VPS55P47111 NAT4YMR069W 858 nt8.26□□□□□ -1.09
VPS55P47111 SWE1YJL187C 2460 nt8.26□□□□□ -1.09
VPS55P47111 GDH3YAL062W 1374 nt8.25□□□□□ -1.09
VPS55P47111 PAU7YAR020C 168 nt8.24□□□□□ -1.09
VPS55P47111 MIR1YJR077C 936 nt8.23□□□□□ -1.09
VPS55P47111 CCA1YER168C 1641 nt8.22□□□□□ -1.09
VPS55P47111 THI74YDR438W 1113 nt8.2□□□□□ -1.1
VPS55P47111 NIT1YIL164C 600 nt8.19□□□□□ -1.1
VPS55P47111 SGT2YOR007C 1041 nt8.19□□□□□ -1.1
VPS55P47111 AVT6YER119C 1347 nt8.19□□□□□ -1.1
VPS55P47111 MSF1YPR047W 1410 nt8.19□□□□□ -1.1
VPS55P47111 GOR1YNL274C 1053 nt8.18□□□□□ -1.1
VPS55P47111 AGP1YCL025C 1902 nt8.15□□□□□ -1.1
VPS55P47111 DAT1YML113W 747 nt8.14□□□□□ -1.11
VPS55P47111 SHB17YKR043C 816 nt8.13□□□□□ -1.11
VPS55P47111 UBA4YHR111W 1323 nt8.12□□□□□ -1.11
VPS55P47111 YCR102CYCR102C 1107 nt8.09□□□□□ -1.11
VPS55P47111 YDR010CYDR010C 333 nt8.09□□□□□ -1.11
VPS55P47111 DUS1YML080W 1272 nt8.09□□□□□ -1.11
VPS55P47111 NAR1YNL240C 1476 nt8.08□□□□□ -1.12
VPS55P47111 DUT1YBR252W 444 nt8.08□□□□□ -1.12
VPS55P47111 YSR3YKR053C 1215 nt8.07□□□□□ -1.12
VPS55P47111 RET2YFR051C 1641 nt8.06□□□□□ -1.12
VPS55P47111 YGL034CYGL034C 366 nt8.05□□□□□ -1.12
VPS55P47111 SBA1YKL117W 651 nt8.05□□□□□ -1.12
VPS55P47111 YCL074WYCL074W 927 nt8.04□□□□□ -1.12
VPS55P47111 YCR087WYCR087W 516 nt8.04□□□□□ -1.12
VPS55P47111 PHO89YBR296C 1725 nt8.02□□□□□ -1.13
VPS55P47111 STR3YGL184C 1398 nt8□□□□□ -1.13
VPS55P47111 HSL7YBR133C 2484 nt8□□□□□ -1.13
VPS55P47111 NBP35YGL091C 987 nt7.99□□□□□ -1.13
VPS55P47111 XYL2YLR070C 1071 nt7.99□□□□□ -1.13
VPS55P47111 FUR4YBR021W 1902 nt7.99□□□□□ -1.13
VPS55P47111 AQY2YLL052C 450 nt7.98□□□□□ -1.13
VPS55P47111 MRP20YDR405W 792 nt7.96□□□□□ -1.14
VPS55P47111 TIR3YIL011W 810 nt7.96□□□□□ -1.14
VPS55P47111 RDN18-1RDN18-1 1800 nt7.96□□□□□ -1.14
VPS55P47111 RDN18-2RDN18-2 1800 nt7.96□□□□□ -1.14
VPS55P47111 AIM45YPR004C 1035 nt7.95□□□□□ -1.14
VPS55P47111 SFA1YDL168W 1161 nt7.94□□□□□ -1.14
VPS55P47111 RBG1YAL036C 1110 nt7.93□□□□□ -1.14
VPS55P47111 NDI1YML120C 1542 nt7.93□□□□□ -1.14
VPS55P47111 YHL019W-AYHL019W-A 594 nt7.92□□□□□ -1.14
VPS55P47111 COQ2YNR041C 1119 nt7.92□□□□□ -1.14
VPS55P47111 AAC1YMR056C 930 nt7.91□□□□□ -1.14
VPS55P47111 RDN25-1RDN25-1 3396 nt7.9□□□□□ -1.14
VPS55P47111 RDN25-2RDN25-2 3396 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms