Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 WSC2YNL283C 1512 nt10.89□□□□□ -0.67
RPH1P39956 DDR2YOL052C-A 186 nt10.89□□□□□ -0.67
RPH1P39956 YFL067WYFL067W 528 nt10.86□□□□□ -0.67
RPH1P39956 PTK1YKL198C 1989 nt10.86□□□□□ -0.67
RPH1P39956 ATF2YGR177C 1608 nt10.85□□□□□ -0.67
RPH1P39956 STB1YNL309W 1263 nt10.84□□□□□ -0.67
RPH1P39956 NCP1YHR042W 2076 nt10.84□□□□□ -0.67
RPH1P39956 YDR524C-BYDR524C-B 201 nt10.81□□□□□ -0.68
RPH1P39956 SPC25YER018C 666 nt10.8□□□□□ -0.68
RPH1P39956 CRR1YLR213C 1269 nt10.8□□□□□ -0.68
RPH1P39956 MCH5YOR306C 1566 nt10.79□□□□□ -0.68
RPH1P39956 YDL086C-AYDL086C-A 435 nt10.78□□□□□ -0.68
RPH1P39956 GPI16YHR188C 1833 nt10.78□□□□□ -0.68
RPH1P39956 CCT4YDL143W 1587 nt10.77□□□□□ -0.68
RPH1P39956 YFR018CYFR018C 1092 nt10.77□□□□□ -0.69
RPH1P39956 HEM12YDR047W 1089 nt10.75□□□□□ -0.69
RPH1P39956 SWC5YBR231C 912 nt10.75□□□□□ -0.69
RPH1P39956 RRT5YFR032C 870 nt10.73□□□□□ -0.69
RPH1P39956 YLR415CYLR415C 339 nt10.73□□□□□ -0.69
RPH1P39956 LYS4YDR234W 2082 nt10.73□□□□□ -0.69
RPH1P39956 VPS60YDR486C 690 nt10.72□□□□□ -0.69
RPH1P39956 SNG1YGR197C 1644 nt10.72□□□□□ -0.69
RPH1P39956 FEN2YCR028C 1539 nt10.71□□□□□ -0.69
RPH1P39956 BDH1YAL060W 1149 nt10.71□□□□□ -0.69
RPH1P39956 ANP1YEL036C 1503 nt10.69□□□□□ -0.7
RPH1P39956 MIC10YCL057C-A 294 nt10.69□□□□□ -0.7
RPH1P39956 PRE6YOL038W 765 nt10.68□□□□□ -0.7
RPH1P39956 YFL066CYFL066C 1179 nt10.67□□□□□ -0.7
RPH1P39956 PAU16YKL224C 372 nt10.67□□□□□ -0.7
RPH1P39956 PEX25YPL112C 1185 nt10.66□□□□□ -0.7
RPH1P39956 YSP3YOR003W 1437 nt10.66□□□□□ -0.7
RPH1P39956 ALG3YBL082C 1377 nt10.65□□□□□ -0.71
RPH1P39956 YNL115CYNL115C 1935 nt10.64□□□□□ -0.71
RPH1P39956 YFL015W-AYFL015W-A 318 nt10.62□□□□□ -0.71
RPH1P39956 YIR016WYIR016W 798 nt10.62□□□□□ -0.71
RPH1P39956 BNA2YJR078W 1362 nt10.59□□□□□ -0.71
RPH1P39956 ALG12YNR030W 1656 nt10.58□□□□□ -0.72
RPH1P39956 YFL054CYFL054C 1941 nt10.58□□□□□ -0.72
RPH1P39956 YHR056W-AYHR056W-A 435 nt10.55□□□□□ -0.72
RPH1P39956 RAX1YOR301W 1308 nt10.54□□□□□ -0.72
RPH1P39956 SPT8YLR055C 1809 nt10.54□□□□□ -0.72
RPH1P39956 HSP60YLR259C 1719 nt10.51□□□□□ -0.73
RPH1P39956 TIM17YJL143W 477 nt10.49□□□□□ -0.73
RPH1P39956 VPS75YNL246W 795 nt10.49□□□□□ -0.73
RPH1P39956 GLK1YCL040W 1503 nt10.48□□□□□ -0.73
RPH1P39956 NAT4YMR069W 858 nt10.47□□□□□ -0.73
RPH1P39956 Q0182Q0182 405 nt10.46□□□□□ -0.73
RPH1P39956 PAU7YAR020C 168 nt10.45□□□□□ -0.74
RPH1P39956 HHO1YPL127C 777 nt10.45□□□□□ -0.74
RPH1P39956 XDJ1YLR090W 1380 nt10.44□□□□□ -0.74
RPH1P39956 MIC12YBR262C 321 nt10.44□□□□□ -0.74
RPH1P39956 SHM2YLR058C 1410 nt10.42□□□□□ -0.74
RPH1P39956 GDH3YAL062W 1374 nt10.41□□□□□ -0.74
RPH1P39956 THI74YDR438W 1113 nt10.38□□□□□ -0.75
RPH1P39956 YGR201CYGR201C 678 nt10.37□□□□□ -0.75
RPH1P39956 MIR1YJR077C 936 nt10.37□□□□□ -0.75
RPH1P39956 MSF1YPR047W 1410 nt10.35□□□□□ -0.75
RPH1P39956 AVT6YER119C 1347 nt10.32□□□□□ -0.76
RPH1P39956 SGT2YOR007C 1041 nt10.31□□□□□ -0.76
RPH1P39956 YJL225CYJL225C 5277 nt10.31□□□□□ -0.76
RPH1P39956 GOR1YNL274C 1053 nt10.3□□□□□ -0.76
RPH1P39956 SWE1YJL187C 2460 nt10.29□□□□□ -0.76
RPH1P39956 CCA1YER168C 1641 nt10.29□□□□□ -0.76
RPH1P39956 NIT1YIL164C 600 nt10.28□□□□□ -0.76
RPH1P39956 NAR1YNL240C 1476 nt10.28□□□□□ -0.76
RPH1P39956 SBA1YKL117W 651 nt10.27□□□□□ -0.77
RPH1P39956 SHB17YKR043C 816 nt10.27□□□□□ -0.77
RPH1P39956 DAT1YML113W 747 nt10.27□□□□□ -0.77
RPH1P39956 UBA4YHR111W 1323 nt10.25□□□□□ -0.77
RPH1P39956 YSR3YKR053C 1215 nt10.21□□□□□ -0.77
RPH1P39956 AGP1YCL025C 1902 nt10.21□□□□□ -0.78
RPH1P39956 DUS1YML080W 1272 nt10.2□□□□□ -0.78
RPH1P39956 YGL034CYGL034C 366 nt10.19□□□□□ -0.78
RPH1P39956 DUT1YBR252W 444 nt10.19□□□□□ -0.78
RPH1P39956 YDR010CYDR010C 333 nt10.18□□□□□ -0.78
RPH1P39956 YCR102CYCR102C 1107 nt10.16□□□□□ -0.78
RPH1P39956 PHO89YBR296C 1725 nt10.15□□□□□ -0.78
RPH1P39956 XYL2YLR070C 1071 nt10.14□□□□□ -0.79
RPH1P39956 RET2YFR051C 1641 nt10.12□□□□□ -0.79
RPH1P39956 YCR087WYCR087W 516 nt10.1□□□□□ -0.79
RPH1P39956 RBG1YAL036C 1110 nt10.08□□□□□ -0.8
RPH1P39956 NDI1YML120C 1542 nt10.07□□□□□ -0.8
RPH1P39956 AQY2YLL052C 450 nt10.07□□□□□ -0.8
RPH1P39956 MRP20YDR405W 792 nt10.06□□□□□ -0.8
RPH1P39956 HSL7YBR133C 2484 nt10.05□□□□□ -0.8
RPH1P39956 STR3YGL184C 1398 nt10.04□□□□□ -0.8
RPH1P39956 FUR4YBR021W 1902 nt10.04□□□□□ -0.8
RPH1P39956 YCL074WYCL074W 927 nt10.04□□□□□ -0.8
RPH1P39956 CMP2YML057W 1815 nt10.03□□□□□ -0.8
RPH1P39956 GLR1YPL091W 1452 nt10.03□□□□□ -0.8
RPH1P39956 AAC1YMR056C 930 nt10.02□□□□□ -0.81
RPH1P39956 AIM45YPR004C 1035 nt10.02□□□□□ -0.81
RPH1P39956 NBP35YGL091C 987 nt10.01□□□□□ -0.81
RPH1P39956 YHL019W-AYHL019W-A 594 nt10□□□□□ -0.81
RPH1P39956 PBP1YGR178C 2169 nt9.99□□□□□ -0.81
RPH1P39956 BIO5YNR056C 1686 nt9.99□□□□□ -0.81
RPH1P39956 SFA1YDL168W 1161 nt9.99□□□□□ -0.81
RPH1P39956 COQ2YNR041C 1119 nt9.99□□□□□ -0.81
RPH1P39956 PRP4YPR178W 1398 nt9.99□□□□□ -0.81
RPH1P39956 YMR244WYMR244W 1068 nt9.98□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 51 ms