Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RetP35546 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RetP35546 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RetP35546 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RetP35546 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RetP35546 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RetP35546 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RetP35546 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RetP35546 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RetP35546 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RetP35546 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RetP35546 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RetP35546 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RetP35546 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RetP35546 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RetP35546 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.35■■□□□ 1.49
RetP35546 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RetP35546 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RetP35546 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.32■■□□□ 1.48
RetP35546 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RetP35546 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RetP35546 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RetP35546 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RetP35546 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RetP35546 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RetP35546 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RetP35546 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RetP35546 Gm16148-201ENSMUST00000119653 893 ntBASIC24.2■■□□□ 1.46
RetP35546 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
RetP35546 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RetP35546 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RetP35546 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.15■■□□□ 1.46
RetP35546 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RetP35546 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.14■■□□□ 1.45
RetP35546 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.11■■□□□ 1.45
RetP35546 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.11■■□□□ 1.45
RetP35546 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RetP35546 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RetP35546 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RetP35546 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
RetP35546 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RetP35546 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RetP35546 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RetP35546 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RetP35546 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RetP35546 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RetP35546 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RetP35546 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RetP35546 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.99■■□□□ 1.43
RetP35546 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RetP35546 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RetP35546 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.98■■□□□ 1.43
RetP35546 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RetP35546 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RetP35546 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.97■■□□□ 1.43
RetP35546 Mipep-204ENSMUST00000225043 1548 ntBASIC23.96■■□□□ 1.43
RetP35546 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.92■■□□□ 1.42
RetP35546 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RetP35546 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RetP35546 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.89■■□□□ 1.41
RetP35546 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RetP35546 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RetP35546 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RetP35546 Peli2-204ENSMUST00000226513 1320 ntBASIC23.87■■□□□ 1.41
RetP35546 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RetP35546 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RetP35546 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RetP35546 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RetP35546 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.87■■□□□ 1.41
RetP35546 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RetP35546 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.86■■□□□ 1.41
RetP35546 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RetP35546 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RetP35546 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RetP35546 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RetP35546 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RetP35546 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RetP35546 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.82■■□□□ 1.4
RetP35546 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RetP35546 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RetP35546 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RetP35546 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RetP35546 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RetP35546 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RetP35546 Gm45855-201ENSMUST00000212546 880 ntBASIC23.78■■□□□ 1.4
RetP35546 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.77■■□□□ 1.4
RetP35546 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.77■■□□□ 1.4
RetP35546 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RetP35546 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RetP35546 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RetP35546 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RetP35546 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RetP35546 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RetP35546 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RetP35546 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RetP35546 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RetP35546 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
RetP35546 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.71■■□□□ 1.39
RetP35546 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RetP35546 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 1206.9 ms