Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P06328 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
P06328 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06328 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06328 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
P06328 Gm25262-201ENSMUST00000174934 133 ntBASIC19.04■□□□□ 0.64
P06328 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06328 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.04■□□□□ 0.64
P06328 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06328 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19■□□□□ 0.63
P06328 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06328 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P06328 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P06328 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P06328 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
P06328 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
P06328 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P06328 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
P06328 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P06328 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P06328 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P06328 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
P06328 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P06328 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P06328 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P06328 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06328 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.84■□□□□ 0.61
P06328 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06328 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
P06328 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P06328 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.83■□□□□ 0.6
P06328 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P06328 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06328 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06328 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.82■□□□□ 0.6
P06328 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06328 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06328 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P06328 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
P06328 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P06328 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
P06328 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P06328 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06328 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06328 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06328 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P06328 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P06328 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.76■□□□□ 0.59
P06328 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P06328 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P06328 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
P06328 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.72■□□□□ 0.59
P06328 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P06328 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.72■□□□□ 0.59
P06328 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P06328 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.71■□□□□ 0.59
P06328 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.7■□□□□ 0.58
P06328 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06328 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.7■□□□□ 0.58
P06328 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06328 Zxda-201ENSMUST00000117281 2621 ntBASIC18.7■□□□□ 0.58
P06328 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
P06328 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06328 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
P06328 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
P06328 Gm27322-201ENSMUST00000184007 104 ntBASIC18.68■□□□□ 0.58
P06328 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06328 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06328 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P06328 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
P06328 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P06328 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06328 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06328 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P06328 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06328 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06328 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
P06328 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06328 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P06328 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06328 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.59■□□□□ 0.57
P06328 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P06328 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P06328 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06328 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06328 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06328 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.56■□□□□ 0.56
P06328 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06328 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P06328 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06328 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06328 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P06328 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
P06328 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
P06328 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
P06328 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06328 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06328 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P06328 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.48■□□□□ 0.55
P06328 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms