Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
P06323 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P06323 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P06323 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P06323 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06323 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06323 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P06323 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.75■□□□□ 0.91
P06323 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P06323 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
P06323 Zxda-201ENSMUST00000117281 2621 ntBASIC20.73■□□□□ 0.91
P06323 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.72■□□□□ 0.91
P06323 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P06323 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P06323 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
P06323 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P06323 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P06323 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P06323 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P06323 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.68■□□□□ 0.9
P06323 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P06323 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
P06323 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P06323 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.64■□□□□ 0.89
P06323 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
P06323 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P06323 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
P06323 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P06323 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P06323 Gm27322-201ENSMUST00000184007 104 ntBASIC20.59■□□□□ 0.89
P06323 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
P06323 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P06323 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P06323 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P06323 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.57■□□□□ 0.88
P06323 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P06323 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
P06323 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
P06323 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
P06323 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
P06323 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P06323 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.54■□□□□ 0.88
P06323 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P06323 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.53■□□□□ 0.88
P06323 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P06323 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P06323 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P06323 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.53■□□□□ 0.88
P06323 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.52■□□□□ 0.88
P06323 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
P06323 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06323 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06323 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
P06323 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
P06323 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.5■□□□□ 0.87
P06323 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P06323 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P06323 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
P06323 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P06323 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P06323 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
P06323 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P06323 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
P06323 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P06323 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
P06323 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P06323 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P06323 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P06323 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.41■□□□□ 0.86
P06323 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06323 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06323 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06323 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.39■□□□□ 0.85
P06323 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
P06323 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06323 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06323 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06323 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.36■□□□□ 0.85
P06323 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06323 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06323 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06323 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06323 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06323 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
P06323 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06323 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06323 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06323 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06323 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06323 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06323 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P06323 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06323 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P06323 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06323 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06323 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06323 Gm26115-201ENSMUST00000175605 87 ntBASIC20.27■□□□□ 0.84
P06323 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P06323 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
P06323 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms