Protein–RNA interactions for Protein: P04918

Saa3, Serum amyloid A-3 protein, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Saa3P04918 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Saa3P04918 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.62■□□□□ 0.73
Saa3P04918 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Saa3P04918 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Saa3P04918 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Saa3P04918 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Saa3P04918 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Saa3P04918 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Saa3P04918 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Saa3P04918 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Saa3P04918 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Saa3P04918 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.57■□□□□ 0.72
Saa3P04918 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Saa3P04918 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.57■□□□□ 0.72
Saa3P04918 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Saa3P04918 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Saa3P04918 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Saa3P04918 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Saa3P04918 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Saa3P04918 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Saa3P04918 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.52■□□□□ 0.72
Saa3P04918 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Saa3P04918 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Saa3P04918 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Saa3P04918 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Saa3P04918 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Saa3P04918 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Saa3P04918 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Saa3P04918 Zxda-201ENSMUST00000117281 2621 ntBASIC19.48■□□□□ 0.71
Saa3P04918 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Saa3P04918 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Saa3P04918 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Saa3P04918 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.46■□□□□ 0.71
Saa3P04918 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Saa3P04918 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Saa3P04918 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Saa3P04918 Mipep-204ENSMUST00000225043 1548 ntBASIC19.45■□□□□ 0.7
Saa3P04918 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Saa3P04918 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Saa3P04918 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Saa3P04918 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.43■□□□□ 0.7
Saa3P04918 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Saa3P04918 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Saa3P04918 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Saa3P04918 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Saa3P04918 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.4■□□□□ 0.7
Saa3P04918 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Saa3P04918 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Saa3P04918 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Saa3P04918 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Saa3P04918 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Saa3P04918 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Saa3P04918 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Saa3P04918 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.36■□□□□ 0.69
Saa3P04918 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Saa3P04918 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Saa3P04918 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Saa3P04918 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.35■□□□□ 0.69
Saa3P04918 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Saa3P04918 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Saa3P04918 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Saa3P04918 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Saa3P04918 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Saa3P04918 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Saa3P04918 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Saa3P04918 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Saa3P04918 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Saa3P04918 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Saa3P04918 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Saa3P04918 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Saa3P04918 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Saa3P04918 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Saa3P04918 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Saa3P04918 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Saa3P04918 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Saa3P04918 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Saa3P04918 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Saa3P04918 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Saa3P04918 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Saa3P04918 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Saa3P04918 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Saa3P04918 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Saa3P04918 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Saa3P04918 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Saa3P04918 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Saa3P04918 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Saa3P04918 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Saa3P04918 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Saa3P04918 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Saa3P04918 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Saa3P04918 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Saa3P04918 Amer2-203ENSMUST00000225247 2662 ntBASIC19.18■□□□□ 0.66
Saa3P04918 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Saa3P04918 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Saa3P04918 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Saa3P04918 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Saa3P04918 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Saa3P04918 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Saa3P04918 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Saa3P04918 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms