Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
P01788 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01788 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01788 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01788 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P01788 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01788 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01788 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01788 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
P01788 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01788 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01788 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
P01788 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01788 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01788 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01788 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
P01788 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
P01788 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01788 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
P01788 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
P01788 Mipep-204ENSMUST00000225043 1548 ntBASIC20.43■□□□□ 0.86
P01788 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P01788 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.42■□□□□ 0.86
P01788 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P01788 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
P01788 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P01788 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01788 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01788 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.37■□□□□ 0.85
P01788 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
P01788 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01788 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01788 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P01788 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P01788 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01788 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.31■□□□□ 0.84
P01788 Zxda-201ENSMUST00000117281 2621 ntBASIC20.31■□□□□ 0.84
P01788 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
P01788 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P01788 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
P01788 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01788 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
P01788 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01788 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01788 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01788 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
P01788 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01788 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01788 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.23■□□□□ 0.83
P01788 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01788 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01788 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01788 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01788 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01788 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01788 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.18■□□□□ 0.82
P01788 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01788 Gm25262-201ENSMUST00000174934 133 ntBASIC20.16■□□□□ 0.82
P01788 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01788 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01788 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
P01788 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01788 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01788 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
P01788 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01788 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01788 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01788 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
P01788 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P01788 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01788 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01788 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01788 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01788 Amer2-203ENSMUST00000225247 2662 ntBASIC20.05■□□□□ 0.8
P01788 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01788 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01788 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01788 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.02■□□□□ 0.79
P01788 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01788 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01788 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01788 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01788 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01788 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01788 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.98■□□□□ 0.79
P01788 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01788 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P01788 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01788 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01788 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01788 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.95■□□□□ 0.78
P01788 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
P01788 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01788 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P01788 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
P01788 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P01788 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
P01788 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P01788 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01788 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms