Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfsf12O54907 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.29■■□□□ 1
Tnfsf12O54907 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Tnfsf12O54907 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfsf12O54907 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Tnfsf12O54907 Gm26115-201ENSMUST00000175605 87 ntBASIC21.27■■□□□ 1
Tnfsf12O54907 Gm8109-201ENSMUST00000194076 746 ntBASIC21.26■□□□□ 0.99
Tnfsf12O54907 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.23■□□□□ 0.99
Tnfsf12O54907 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfsf12O54907 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.21■□□□□ 0.99
Tnfsf12O54907 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tnfsf12O54907 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfsf12O54907 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfsf12O54907 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.19■□□□□ 0.98
Tnfsf12O54907 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfsf12O54907 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.13■□□□□ 0.97
Tnfsf12O54907 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfsf12O54907 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfsf12O54907 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tnfsf12O54907 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfsf12O54907 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfsf12O54907 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfsf12O54907 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfsf12O54907 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfsf12O54907 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf12O54907 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf12O54907 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfsf12O54907 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tnfsf12O54907 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf12O54907 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf12O54907 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tnfsf12O54907 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf12O54907 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf12O54907 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf12O54907 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.9■□□□□ 0.94
Tnfsf12O54907 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfsf12O54907 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf12O54907 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf12O54907 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.89■□□□□ 0.93
Tnfsf12O54907 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf12O54907 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf12O54907 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf12O54907 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf12O54907 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsf12O54907 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfsf12O54907 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf12O54907 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf12O54907 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf12O54907 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfsf12O54907 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf12O54907 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf12O54907 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf12O54907 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf12O54907 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf12O54907 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tnfsf12O54907 Peli2-204ENSMUST00000226513 1320 ntBASIC20.72■□□□□ 0.91
Tnfsf12O54907 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf12O54907 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Gm24804-201ENSMUST00000174982 85 ntBASIC20.66■□□□□ 0.9
Tnfsf12O54907 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms