Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ap3d1O54774 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Ap3d1O54774 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ap3d1O54774 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ap3d1O54774 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ap3d1O54774 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ap3d1O54774 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ap3d1O54774 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.73■■□□□ 1.87
Ap3d1O54774 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ap3d1O54774 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ap3d1O54774 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Ap3d1O54774 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.69■■□□□ 1.86
Ap3d1O54774 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Ap3d1O54774 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ap3d1O54774 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ap3d1O54774 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ap3d1O54774 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ap3d1O54774 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.62■■□□□ 1.85
Ap3d1O54774 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ap3d1O54774 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ap3d1O54774 Peli2-204ENSMUST00000226513 1320 ntBASIC26.61■■□□□ 1.85
Ap3d1O54774 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ap3d1O54774 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ap3d1O54774 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ap3d1O54774 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.57■■□□□ 1.84
Ap3d1O54774 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ap3d1O54774 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ap3d1O54774 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ap3d1O54774 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ap3d1O54774 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ap3d1O54774 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ap3d1O54774 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ap3d1O54774 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ap3d1O54774 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Ap3d1O54774 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.49■■□□□ 1.83
Ap3d1O54774 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ap3d1O54774 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ap3d1O54774 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.48■■□□□ 1.83
Ap3d1O54774 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ap3d1O54774 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ap3d1O54774 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ap3d1O54774 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
Ap3d1O54774 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ap3d1O54774 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.42■■□□□ 1.82
Ap3d1O54774 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Ap3d1O54774 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Ap3d1O54774 Gm16148-201ENSMUST00000119653 893 ntBASIC26.4■■□□□ 1.82
Ap3d1O54774 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ap3d1O54774 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ap3d1O54774 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ap3d1O54774 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ap3d1O54774 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ap3d1O54774 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.32■■□□□ 1.8
Ap3d1O54774 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ap3d1O54774 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ap3d1O54774 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ap3d1O54774 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ap3d1O54774 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ap3d1O54774 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.23■■□□□ 1.79
Ap3d1O54774 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.23■■□□□ 1.79
Ap3d1O54774 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ap3d1O54774 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ap3d1O54774 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ap3d1O54774 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Ap3d1O54774 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ap3d1O54774 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ap3d1O54774 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ap3d1O54774 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Ap3d1O54774 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ap3d1O54774 Zfp131-205ENSMUST00000223812 663 ntBASIC26.15■■□□□ 1.78
Ap3d1O54774 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Ap3d1O54774 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Ap3d1O54774 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.14■■□□□ 1.77
Ap3d1O54774 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ap3d1O54774 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Ap3d1O54774 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.12■■□□□ 1.77
Ap3d1O54774 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
Ap3d1O54774 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ap3d1O54774 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ap3d1O54774 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ap3d1O54774 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ap3d1O54774 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ap3d1O54774 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ap3d1O54774 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
Ap3d1O54774 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ap3d1O54774 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ap3d1O54774 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ap3d1O54774 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ap3d1O54774 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ap3d1O54774 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ap3d1O54774 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ap3d1O54774 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Ap3d1O54774 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ap3d1O54774 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ap3d1O54774 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ap3d1O54774 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.01■■□□□ 1.75
Ap3d1O54774 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26■■□□□ 1.75
Ap3d1O54774 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ap3d1O54774 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ap3d1O54774 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms