Protein–RNA interactions for Protein: J3QP53

Gm5294, Predicted gene 5294, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5294J3QP53 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5294J3QP53 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm5294J3QP53 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.38■□□□□ 0.85
Gm5294J3QP53 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5294J3QP53 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Gm5294J3QP53 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5294J3QP53 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5294J3QP53 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5294J3QP53 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5294J3QP53 Gm26115-201ENSMUST00000175605 87 ntBASIC20.3■□□□□ 0.84
Gm5294J3QP53 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5294J3QP53 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5294J3QP53 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Gm5294J3QP53 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5294J3QP53 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5294J3QP53 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5294J3QP53 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5294J3QP53 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm5294J3QP53 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5294J3QP53 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5294J3QP53 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm5294J3QP53 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5294J3QP53 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Gm5294J3QP53 Gm8109-201ENSMUST00000194076 746 ntBASIC20.19■□□□□ 0.82
Gm5294J3QP53 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5294J3QP53 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5294J3QP53 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5294J3QP53 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5294J3QP53 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5294J3QP53 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5294J3QP53 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm5294J3QP53 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm5294J3QP53 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5294J3QP53 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5294J3QP53 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5294J3QP53 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5294J3QP53 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5294J3QP53 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5294J3QP53 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm5294J3QP53 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5294J3QP53 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5294J3QP53 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5294J3QP53 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5294J3QP53 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5294J3QP53 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5294J3QP53 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.02■□□□□ 0.8
Gm5294J3QP53 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm5294J3QP53 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm5294J3QP53 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm5294J3QP53 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Gm5294J3QP53 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm5294J3QP53 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5294J3QP53 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5294J3QP53 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.99■□□□□ 0.79
Gm5294J3QP53 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5294J3QP53 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5294J3QP53 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5294J3QP53 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm5294J3QP53 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5294J3QP53 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm5294J3QP53 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5294J3QP53 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm5294J3QP53 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm5294J3QP53 Peli2-204ENSMUST00000226513 1320 ntBASIC19.91■□□□□ 0.78
Gm5294J3QP53 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm5294J3QP53 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm5294J3QP53 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Gm5294J3QP53 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm5294J3QP53 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Gm5294J3QP53 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.88■□□□□ 0.77
Gm5294J3QP53 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm5294J3QP53 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gm5294J3QP53 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Gm5294J3QP53 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm5294J3QP53 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5294J3QP53 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm5294J3QP53 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gm5294J3QP53 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.83■□□□□ 0.77
Gm5294J3QP53 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5294J3QP53 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm5294J3QP53 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.82■□□□□ 0.76
Gm5294J3QP53 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5294J3QP53 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5294J3QP53 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm5294J3QP53 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.78■□□□□ 0.76
Gm5294J3QP53 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Gm5294J3QP53 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Gm5294J3QP53 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm5294J3QP53 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gm5294J3QP53 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5294J3QP53 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.74■□□□□ 0.75
Gm5294J3QP53 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5294J3QP53 Gm24804-201ENSMUST00000174982 85 ntBASIC19.74■□□□□ 0.75
Gm5294J3QP53 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms