Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.65■■□□□ 1.38
Hist1h2acC0HKE2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hist1h2acC0HKE2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Hist1h2acC0HKE2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Hist1h2acC0HKE2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.64■■□□□ 1.37
Hist1h2acC0HKE2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hist1h2acC0HKE2 Gm27322-201ENSMUST00000184007 104 ntBASIC23.63■■□□□ 1.37
Hist1h2acC0HKE2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Hist1h2acC0HKE2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hist1h2acC0HKE2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hist1h2acC0HKE2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.6■■□□□ 1.37
Hist1h2acC0HKE2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.59■■□□□ 1.37
Hist1h2acC0HKE2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.59■■□□□ 1.37
Hist1h2acC0HKE2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hist1h2acC0HKE2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Hist1h2acC0HKE2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hist1h2acC0HKE2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
Hist1h2acC0HKE2 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.49■■□□□ 1.35
Hist1h2acC0HKE2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Hist1h2acC0HKE2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.48■■□□□ 1.35
Hist1h2acC0HKE2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Hist1h2acC0HKE2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hist1h2acC0HKE2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hist1h2acC0HKE2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Hist1h2acC0HKE2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Hist1h2acC0HKE2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Hist1h2acC0HKE2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Hist1h2acC0HKE2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Hist1h2acC0HKE2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hist1h2acC0HKE2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Hist1h2acC0HKE2 Gm26115-201ENSMUST00000175605 87 ntBASIC23.4■■□□□ 1.34
Hist1h2acC0HKE2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.4■■□□□ 1.34
Hist1h2acC0HKE2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Hist1h2acC0HKE2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Hist1h2acC0HKE2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hist1h2acC0HKE2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hist1h2acC0HKE2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hist1h2acC0HKE2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Hist1h2acC0HKE2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Hist1h2acC0HKE2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hist1h2acC0HKE2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Hist1h2acC0HKE2 Gm8109-201ENSMUST00000194076 746 ntBASIC23.3■■□□□ 1.32
Hist1h2acC0HKE2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hist1h2acC0HKE2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.3■■□□□ 1.32
Hist1h2acC0HKE2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Hist1h2acC0HKE2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Hist1h2acC0HKE2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hist1h2acC0HKE2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Hist1h2acC0HKE2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.29■■□□□ 1.32
Hist1h2acC0HKE2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hist1h2acC0HKE2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hist1h2acC0HKE2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hist1h2acC0HKE2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hist1h2acC0HKE2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hist1h2acC0HKE2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hist1h2acC0HKE2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hist1h2acC0HKE2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Hist1h2acC0HKE2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hist1h2acC0HKE2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Hist1h2acC0HKE2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hist1h2acC0HKE2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hist1h2acC0HKE2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hist1h2acC0HKE2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hist1h2acC0HKE2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Hist1h2acC0HKE2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.17■■□□□ 1.3
Hist1h2acC0HKE2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2acC0HKE2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2acC0HKE2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hist1h2acC0HKE2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Hist1h2acC0HKE2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hist1h2acC0HKE2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hist1h2acC0HKE2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Hist1h2acC0HKE2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Hist1h2acC0HKE2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hist1h2acC0HKE2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hist1h2acC0HKE2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hist1h2acC0HKE2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hist1h2acC0HKE2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hist1h2acC0HKE2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hist1h2acC0HKE2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hist1h2acC0HKE2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hist1h2acC0HKE2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hist1h2acC0HKE2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hist1h2acC0HKE2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.03■■□□□ 1.28
Hist1h2acC0HKE2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Hist1h2acC0HKE2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hist1h2acC0HKE2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hist1h2acC0HKE2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2acC0HKE2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hist1h2acC0HKE2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hist1h2acC0HKE2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Hist1h2acC0HKE2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Hist1h2acC0HKE2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Hist1h2acC0HKE2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Hist1h2acC0HKE2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Hist1h2acC0HKE2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Hist1h2acC0HKE2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Hist1h2acC0HKE2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.94■■□□□ 1.26
Hist1h2acC0HKE2 Peli2-204ENSMUST00000226513 1320 ntBASIC22.94■■□□□ 1.26
Hist1h2acC0HKE2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms