Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23,65■■□□□ 1,38
Hist1h2abC0HKE1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Hist1h2abC0HKE1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23,64■■□□□ 1,38
Hist1h2abC0HKE1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23,64■■□□□ 1,38
Hist1h2abC0HKE1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23,64■■□□□ 1,37
Hist1h2abC0HKE1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,64■■□□□ 1,37
Hist1h2abC0HKE1 Gm27322-201ENSMUST00000184007 104 ntBASIC23,63■■□□□ 1,37
Hist1h2abC0HKE1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23,62■■□□□ 1,37
Hist1h2abC0HKE1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23,62■■□□□ 1,37
Hist1h2abC0HKE1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Hist1h2abC0HKE1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23,6■■□□□ 1,37
Hist1h2abC0HKE1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23,59■■□□□ 1,37
Hist1h2abC0HKE1 Gm17082-201ENSMUST00000166043 1091 ntBASIC23,59■■□□□ 1,37
Hist1h2abC0HKE1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Hist1h2abC0HKE1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23,56■■□□□ 1,36
Hist1h2abC0HKE1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23,53■■□□□ 1,36
Hist1h2abC0HKE1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23,52■■□□□ 1,36
Hist1h2abC0HKE1 AC166822.3-201ENSMUST00000227394 661 ntBASIC23,49■■□□□ 1,35
Hist1h2abC0HKE1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23,49■■□□□ 1,35
Hist1h2abC0HKE1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23,48■■□□□ 1,35
Hist1h2abC0HKE1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Hist1h2abC0HKE1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Hist1h2abC0HKE1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Hist1h2abC0HKE1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Hist1h2abC0HKE1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23,43■■□□□ 1,34
Hist1h2abC0HKE1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23,43■■□□□ 1,34
Hist1h2abC0HKE1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Hist1h2abC0HKE1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23,41■■□□□ 1,34
Hist1h2abC0HKE1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Hist1h2abC0HKE1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23,4■■□□□ 1,34
Hist1h2abC0HKE1 Gm26115-201ENSMUST00000175605 87 ntBASIC23,4■■□□□ 1,34
Hist1h2abC0HKE1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23,4■■□□□ 1,34
Hist1h2abC0HKE1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23,39■■□□□ 1,34
Hist1h2abC0HKE1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,33
Hist1h2abC0HKE1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Hist1h2abC0HKE1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23,35■■□□□ 1,33
Hist1h2abC0HKE1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Hist1h2abC0HKE1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23,33■■□□□ 1,33
Hist1h2abC0HKE1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23,32■■□□□ 1,32
Hist1h2abC0HKE1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Hist1h2abC0HKE1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Hist1h2abC0HKE1 Gm8109-201ENSMUST00000194076 746 ntBASIC23,3■■□□□ 1,32
Hist1h2abC0HKE1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Hist1h2abC0HKE1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23,3■■□□□ 1,32
Hist1h2abC0HKE1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23,29■■□□□ 1,32
Hist1h2abC0HKE1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23,29■■□□□ 1,32
Hist1h2abC0HKE1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Hist1h2abC0HKE1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23,29■■□□□ 1,32
Hist1h2abC0HKE1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23,29■■□□□ 1,32
Hist1h2abC0HKE1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23,28■■□□□ 1,32
Hist1h2abC0HKE1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Hist1h2abC0HKE1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23,27■■□□□ 1,32
Hist1h2abC0HKE1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23,24■■□□□ 1,31
Hist1h2abC0HKE1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Hist1h2abC0HKE1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Hist1h2abC0HKE1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23,22■■□□□ 1,31
Hist1h2abC0HKE1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23,21■■□□□ 1,31
Hist1h2abC0HKE1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23,2■■□□□ 1,3
Hist1h2abC0HKE1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23,2■■□□□ 1,3
Hist1h2abC0HKE1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Hist1h2abC0HKE1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Hist1h2abC0HKE1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Hist1h2abC0HKE1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Hist1h2abC0HKE1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23,17■■□□□ 1,3
Hist1h2abC0HKE1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23,17■■□□□ 1,3
Hist1h2abC0HKE1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23,16■■□□□ 1,3
Hist1h2abC0HKE1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Hist1h2abC0HKE1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23,16■■□□□ 1,3
Hist1h2abC0HKE1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23,14■■□□□ 1,3
Hist1h2abC0HKE1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23,13■■□□□ 1,29
Hist1h2abC0HKE1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23,13■■□□□ 1,29
Hist1h2abC0HKE1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23,13■■□□□ 1,29
Hist1h2abC0HKE1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Hist1h2abC0HKE1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Hist1h2abC0HKE1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Hist1h2abC0HKE1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Hist1h2abC0HKE1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Hist1h2abC0HKE1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23,05■■□□□ 1,28
Hist1h2abC0HKE1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23,04■■□□□ 1,28
Hist1h2abC0HKE1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23,04■■□□□ 1,28
Hist1h2abC0HKE1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23,04■■□□□ 1,28
Hist1h2abC0HKE1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23,04■■□□□ 1,28
Hist1h2abC0HKE1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23,03■■□□□ 1,28
Hist1h2abC0HKE1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23,03■■□□□ 1,28
Hist1h2abC0HKE1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23,02■■□□□ 1,28
Hist1h2abC0HKE1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23,02■■□□□ 1,28
Hist1h2abC0HKE1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23,01■■□□□ 1,27
Hist1h2abC0HKE1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Hist1h2abC0HKE1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Hist1h2abC0HKE1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Hist1h2abC0HKE1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Hist1h2abC0HKE1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22,97■■□□□ 1,27
Hist1h2abC0HKE1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Hist1h2abC0HKE1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22,96■■□□□ 1,27
Hist1h2abC0HKE1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22,96■■□□□ 1,27
Hist1h2abC0HKE1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22,95■■□□□ 1,26
Hist1h2abC0HKE1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22,95■■□□□ 1,26
Hist1h2abC0HKE1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22,94■■□□□ 1,26
Hist1h2abC0HKE1 Peli2-204ENSMUST00000226513 1320 ntBASIC22,94■■□□□ 1,26
Hist1h2abC0HKE1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22,94■■□□□ 1,26
Retrieved 100 of 76,532 protein–RNA pairs in 30,6 ms