Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm11127A7VMS2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.78■■□□□ 1.24
Gm11127A7VMS2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm11127A7VMS2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Gm11127A7VMS2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm11127A7VMS2 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.77■■□□□ 1.24
Gm11127A7VMS2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Gm11127A7VMS2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Gm11127A7VMS2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm11127A7VMS2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm11127A7VMS2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.7■■□□□ 1.22
Gm11127A7VMS2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm11127A7VMS2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Gm11127A7VMS2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm11127A7VMS2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm11127A7VMS2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm11127A7VMS2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm11127A7VMS2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm11127A7VMS2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm11127A7VMS2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm11127A7VMS2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm11127A7VMS2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.62■■□□□ 1.21
Gm11127A7VMS2 Gm25262-201ENSMUST00000174934 133 ntBASIC22.62■■□□□ 1.21
Gm11127A7VMS2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Gm11127A7VMS2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm11127A7VMS2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm11127A7VMS2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
Gm11127A7VMS2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Gm11127A7VMS2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Gm11127A7VMS2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Gm11127A7VMS2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Gm11127A7VMS2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm11127A7VMS2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm11127A7VMS2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm11127A7VMS2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm11127A7VMS2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm11127A7VMS2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm11127A7VMS2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm11127A7VMS2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm11127A7VMS2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm11127A7VMS2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Gm11127A7VMS2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm11127A7VMS2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Gm11127A7VMS2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm11127A7VMS2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm11127A7VMS2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm11127A7VMS2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm11127A7VMS2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11127A7VMS2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11127A7VMS2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11127A7VMS2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11127A7VMS2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm11127A7VMS2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Gm11127A7VMS2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm11127A7VMS2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm11127A7VMS2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm11127A7VMS2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm11127A7VMS2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm11127A7VMS2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Gm11127A7VMS2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm11127A7VMS2 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.38■■□□□ 1.17
Gm11127A7VMS2 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.37■■□□□ 1.17
Gm11127A7VMS2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Gm11127A7VMS2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11127A7VMS2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm11127A7VMS2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
Gm11127A7VMS2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Gm11127A7VMS2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm11127A7VMS2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.29■■□□□ 1.16
Gm11127A7VMS2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Gm11127A7VMS2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Gm11127A7VMS2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Gm11127A7VMS2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm11127A7VMS2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11127A7VMS2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11127A7VMS2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11127A7VMS2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm11127A7VMS2 Mipep-204ENSMUST00000225043 1548 ntBASIC22.23■■□□□ 1.15
Gm11127A7VMS2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.23■■□□□ 1.15
Gm11127A7VMS2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Gm11127A7VMS2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11127A7VMS2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11127A7VMS2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Gm11127A7VMS2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.2■■□□□ 1.14
Gm11127A7VMS2 Amer2-203ENSMUST00000225247 2662 ntBASIC22.2■■□□□ 1.14
Gm11127A7VMS2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm11127A7VMS2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Gm11127A7VMS2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm11127A7VMS2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Gm11127A7VMS2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Gm11127A7VMS2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Gm11127A7VMS2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm11127A7VMS2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Gm11127A7VMS2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Gm11127A7VMS2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.14■■□□□ 1.13
Gm11127A7VMS2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Gm11127A7VMS2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms