Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lnp1A0A1B0GSK3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lnp1A0A1B0GSK3 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.74■■□□□ 1.07
Lnp1A0A1B0GSK3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lnp1A0A1B0GSK3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lnp1A0A1B0GSK3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.72■■□□□ 1.07
Lnp1A0A1B0GSK3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lnp1A0A1B0GSK3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.69■■□□□ 1.06
Lnp1A0A1B0GSK3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lnp1A0A1B0GSK3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lnp1A0A1B0GSK3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Lnp1A0A1B0GSK3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lnp1A0A1B0GSK3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lnp1A0A1B0GSK3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lnp1A0A1B0GSK3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lnp1A0A1B0GSK3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lnp1A0A1B0GSK3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lnp1A0A1B0GSK3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lnp1A0A1B0GSK3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lnp1A0A1B0GSK3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lnp1A0A1B0GSK3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lnp1A0A1B0GSK3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Lnp1A0A1B0GSK3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lnp1A0A1B0GSK3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.5■■□□□ 1.03
Lnp1A0A1B0GSK3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lnp1A0A1B0GSK3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lnp1A0A1B0GSK3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lnp1A0A1B0GSK3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lnp1A0A1B0GSK3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lnp1A0A1B0GSK3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lnp1A0A1B0GSK3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Lnp1A0A1B0GSK3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lnp1A0A1B0GSK3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lnp1A0A1B0GSK3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lnp1A0A1B0GSK3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lnp1A0A1B0GSK3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lnp1A0A1B0GSK3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lnp1A0A1B0GSK3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lnp1A0A1B0GSK3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.35■■□□□ 1.01
Lnp1A0A1B0GSK3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.34■■□□□ 1.01
Lnp1A0A1B0GSK3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lnp1A0A1B0GSK3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Lnp1A0A1B0GSK3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lnp1A0A1B0GSK3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lnp1A0A1B0GSK3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lnp1A0A1B0GSK3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lnp1A0A1B0GSK3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lnp1A0A1B0GSK3 Peli2-204ENSMUST00000226513 1320 ntBASIC21.27■□□□□ 0.99
Lnp1A0A1B0GSK3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.26■□□□□ 0.99
Lnp1A0A1B0GSK3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.25■□□□□ 0.99
Lnp1A0A1B0GSK3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lnp1A0A1B0GSK3 Gm24804-201ENSMUST00000174982 85 ntBASIC21.23■□□□□ 0.99
Lnp1A0A1B0GSK3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lnp1A0A1B0GSK3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lnp1A0A1B0GSK3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lnp1A0A1B0GSK3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lnp1A0A1B0GSK3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lnp1A0A1B0GSK3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lnp1A0A1B0GSK3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lnp1A0A1B0GSK3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lnp1A0A1B0GSK3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lnp1A0A1B0GSK3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lnp1A0A1B0GSK3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Lnp1A0A1B0GSK3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lnp1A0A1B0GSK3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lnp1A0A1B0GSK3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.07■□□□□ 0.96
Lnp1A0A1B0GSK3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Lnp1A0A1B0GSK3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms