Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Pcna-ps2A0A140T8V5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Pcna-ps2A0A140T8V5 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.04■■□□□ 1.76
Pcna-ps2A0A140T8V5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcna-ps2A0A140T8V5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.03■■□□□ 1.76
Pcna-ps2A0A140T8V5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Pcna-ps2A0A140T8V5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Pcna-ps2A0A140T8V5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcna-ps2A0A140T8V5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcna-ps2A0A140T8V5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Pcna-ps2A0A140T8V5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.95■■□□□ 1.75
Pcna-ps2A0A140T8V5 Mipep-204ENSMUST00000225043 1548 ntBASIC25.95■■□□□ 1.74
Pcna-ps2A0A140T8V5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.93■■□□□ 1.74
Pcna-ps2A0A140T8V5 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.92■■□□□ 1.74
Pcna-ps2A0A140T8V5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcna-ps2A0A140T8V5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Pcna-ps2A0A140T8V5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcna-ps2A0A140T8V5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcna-ps2A0A140T8V5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcna-ps2A0A140T8V5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcna-ps2A0A140T8V5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcna-ps2A0A140T8V5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcna-ps2A0A140T8V5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pcna-ps2A0A140T8V5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcna-ps2A0A140T8V5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcna-ps2A0A140T8V5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcna-ps2A0A140T8V5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcna-ps2A0A140T8V5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcna-ps2A0A140T8V5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.7■■□□□ 1.7
Pcna-ps2A0A140T8V5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcna-ps2A0A140T8V5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcna-ps2A0A140T8V5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcna-ps2A0A140T8V5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Pcna-ps2A0A140T8V5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.67■■□□□ 1.7
Pcna-ps2A0A140T8V5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcna-ps2A0A140T8V5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcna-ps2A0A140T8V5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcna-ps2A0A140T8V5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Pcna-ps2A0A140T8V5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
Pcna-ps2A0A140T8V5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcna-ps2A0A140T8V5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcna-ps2A0A140T8V5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcna-ps2A0A140T8V5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcna-ps2A0A140T8V5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcna-ps2A0A140T8V5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcna-ps2A0A140T8V5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcna-ps2A0A140T8V5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcna-ps2A0A140T8V5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcna-ps2A0A140T8V5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.58■■□□□ 1.69
Pcna-ps2A0A140T8V5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcna-ps2A0A140T8V5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcna-ps2A0A140T8V5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Pcna-ps2A0A140T8V5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcna-ps2A0A140T8V5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcna-ps2A0A140T8V5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcna-ps2A0A140T8V5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Pcna-ps2A0A140T8V5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcna-ps2A0A140T8V5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcna-ps2A0A140T8V5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcna-ps2A0A140T8V5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcna-ps2A0A140T8V5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.47■■□□□ 1.67
Pcna-ps2A0A140T8V5 Gm24804-201ENSMUST00000174982 85 ntBASIC25.46■■□□□ 1.67
Pcna-ps2A0A140T8V5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcna-ps2A0A140T8V5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcna-ps2A0A140T8V5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcna-ps2A0A140T8V5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcna-ps2A0A140T8V5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcna-ps2A0A140T8V5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Pcna-ps2A0A140T8V5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcna-ps2A0A140T8V5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcna-ps2A0A140T8V5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcna-ps2A0A140T8V5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcna-ps2A0A140T8V5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcna-ps2A0A140T8V5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcna-ps2A0A140T8V5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcna-ps2A0A140T8V5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Pcna-ps2A0A140T8V5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
Pcna-ps2A0A140T8V5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcna-ps2A0A140T8V5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcna-ps2A0A140T8V5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcna-ps2A0A140T8V5 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Peli2-204ENSMUST00000226513 1320 ntBASIC25.32■■□□□ 1.64
Pcna-ps2A0A140T8V5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Pcna-ps2A0A140T8V5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcna-ps2A0A140T8V5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcna-ps2A0A140T8V5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcna-ps2A0A140T8V5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.29■■□□□ 1.64
Pcna-ps2A0A140T8V5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcna-ps2A0A140T8V5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcna-ps2A0A140T8V5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.26■■□□□ 1.63
Pcna-ps2A0A140T8V5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pcna-ps2A0A140T8V5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Pcna-ps2A0A140T8V5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms