Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Lcmt1A0A0U1RNF2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Lcmt1A0A0U1RNF2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Lcmt1A0A0U1RNF2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lcmt1A0A0U1RNF2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.87■■■□□ 2.21
Lcmt1A0A0U1RNF2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Lcmt1A0A0U1RNF2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Lcmt1A0A0U1RNF2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Lcmt1A0A0U1RNF2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Lcmt1A0A0U1RNF2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Lcmt1A0A0U1RNF2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Lcmt1A0A0U1RNF2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.83■■■□□ 2.2
Lcmt1A0A0U1RNF2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.81■■■□□ 2.2
Lcmt1A0A0U1RNF2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.8■■■□□ 2.2
Lcmt1A0A0U1RNF2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lcmt1A0A0U1RNF2 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.76■■■□□ 2.19
Lcmt1A0A0U1RNF2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Lcmt1A0A0U1RNF2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Lcmt1A0A0U1RNF2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lcmt1A0A0U1RNF2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lcmt1A0A0U1RNF2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Lcmt1A0A0U1RNF2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Lcmt1A0A0U1RNF2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Lcmt1A0A0U1RNF2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Lcmt1A0A0U1RNF2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Lcmt1A0A0U1RNF2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lcmt1A0A0U1RNF2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
Lcmt1A0A0U1RNF2 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.59■■■□□ 2.17
Lcmt1A0A0U1RNF2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Lcmt1A0A0U1RNF2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Lcmt1A0A0U1RNF2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Lcmt1A0A0U1RNF2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.53■■■□□ 2.16
Lcmt1A0A0U1RNF2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Lcmt1A0A0U1RNF2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.16
Lcmt1A0A0U1RNF2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Lcmt1A0A0U1RNF2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lcmt1A0A0U1RNF2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
Lcmt1A0A0U1RNF2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lcmt1A0A0U1RNF2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lcmt1A0A0U1RNF2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lcmt1A0A0U1RNF2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Lcmt1A0A0U1RNF2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Lcmt1A0A0U1RNF2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.45■■■□□ 2.14
Lcmt1A0A0U1RNF2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Lcmt1A0A0U1RNF2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Lcmt1A0A0U1RNF2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Lcmt1A0A0U1RNF2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Lcmt1A0A0U1RNF2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Lcmt1A0A0U1RNF2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Lcmt1A0A0U1RNF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Lcmt1A0A0U1RNF2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.38■■■□□ 2.13
Lcmt1A0A0U1RNF2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Lcmt1A0A0U1RNF2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Lcmt1A0A0U1RNF2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Lcmt1A0A0U1RNF2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Lcmt1A0A0U1RNF2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Lcmt1A0A0U1RNF2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lcmt1A0A0U1RNF2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Lcmt1A0A0U1RNF2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Lcmt1A0A0U1RNF2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Lcmt1A0A0U1RNF2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Lcmt1A0A0U1RNF2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Lcmt1A0A0U1RNF2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Lcmt1A0A0U1RNF2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.3■■■□□ 2.12
Lcmt1A0A0U1RNF2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.3■■■□□ 2.12
Lcmt1A0A0U1RNF2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Lcmt1A0A0U1RNF2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Lcmt1A0A0U1RNF2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Lcmt1A0A0U1RNF2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Lcmt1A0A0U1RNF2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Lcmt1A0A0U1RNF2 Peli2-204ENSMUST00000226513 1320 ntBASIC28.24■■■□□ 2.11
Lcmt1A0A0U1RNF2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Lcmt1A0A0U1RNF2 Gm24804-201ENSMUST00000174982 85 ntBASIC28.22■■■□□ 2.11
Lcmt1A0A0U1RNF2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lcmt1A0A0U1RNF2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lcmt1A0A0U1RNF2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Lcmt1A0A0U1RNF2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Lcmt1A0A0U1RNF2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Lcmt1A0A0U1RNF2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lcmt1A0A0U1RNF2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Lcmt1A0A0U1RNF2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.14■■■□□ 2.1
Lcmt1A0A0U1RNF2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Lcmt1A0A0U1RNF2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lcmt1A0A0U1RNF2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Lcmt1A0A0U1RNF2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Lcmt1A0A0U1RNF2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lcmt1A0A0U1RNF2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lcmt1A0A0U1RNF2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Lcmt1A0A0U1RNF2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lcmt1A0A0U1RNF2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lcmt1A0A0U1RNF2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.05■■■□□ 2.08
Lcmt1A0A0U1RNF2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
Lcmt1A0A0U1RNF2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Lcmt1A0A0U1RNF2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lcmt1A0A0U1RNF2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lcmt1A0A0U1RNF2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Lcmt1A0A0U1RNF2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Lcmt1A0A0U1RNF2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.02■■■□□ 2.08
Lcmt1A0A0U1RNF2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Lcmt1A0A0U1RNF2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms