Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav13n-4A0A0G2JG01 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trav13n-4A0A0G2JG01 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.88■□□□□ 0.93
Trav13n-4A0A0G2JG01 Zfp131-205ENSMUST00000223812 663 ntBASIC20.88■□□□□ 0.93
Trav13n-4A0A0G2JG01 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav13n-4A0A0G2JG01 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav13n-4A0A0G2JG01 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav13n-4A0A0G2JG01 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav13n-4A0A0G2JG01 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav13n-4A0A0G2JG01 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav13n-4A0A0G2JG01 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav13n-4A0A0G2JG01 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav13n-4A0A0G2JG01 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.82■□□□□ 0.92
Trav13n-4A0A0G2JG01 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav13n-4A0A0G2JG01 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav13n-4A0A0G2JG01 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav13n-4A0A0G2JG01 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav13n-4A0A0G2JG01 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav13n-4A0A0G2JG01 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav13n-4A0A0G2JG01 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav13n-4A0A0G2JG01 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trav13n-4A0A0G2JG01 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.77■□□□□ 0.92
Trav13n-4A0A0G2JG01 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.75■□□□□ 0.91
Trav13n-4A0A0G2JG01 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trav13n-4A0A0G2JG01 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav13n-4A0A0G2JG01 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav13n-4A0A0G2JG01 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav13n-4A0A0G2JG01 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.71■□□□□ 0.91
Trav13n-4A0A0G2JG01 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav13n-4A0A0G2JG01 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav13n-4A0A0G2JG01 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav13n-4A0A0G2JG01 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav13n-4A0A0G2JG01 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.65■□□□□ 0.9
Trav13n-4A0A0G2JG01 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trav13n-4A0A0G2JG01 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.63■□□□□ 0.89
Trav13n-4A0A0G2JG01 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13n-4A0A0G2JG01 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13n-4A0A0G2JG01 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav13n-4A0A0G2JG01 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trav13n-4A0A0G2JG01 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav13n-4A0A0G2JG01 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav13n-4A0A0G2JG01 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav13n-4A0A0G2JG01 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trav13n-4A0A0G2JG01 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav13n-4A0A0G2JG01 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav13n-4A0A0G2JG01 Gm16148-201ENSMUST00000119653 893 ntBASIC20.57■□□□□ 0.88
Trav13n-4A0A0G2JG01 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav13n-4A0A0G2JG01 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav13n-4A0A0G2JG01 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trav13n-4A0A0G2JG01 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav13n-4A0A0G2JG01 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav13n-4A0A0G2JG01 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav13n-4A0A0G2JG01 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.51■□□□□ 0.87
Trav13n-4A0A0G2JG01 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trav13n-4A0A0G2JG01 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav13n-4A0A0G2JG01 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav13n-4A0A0G2JG01 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav13n-4A0A0G2JG01 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav13n-4A0A0G2JG01 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav13n-4A0A0G2JG01 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav13n-4A0A0G2JG01 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13n-4A0A0G2JG01 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav13n-4A0A0G2JG01 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav13n-4A0A0G2JG01 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav13n-4A0A0G2JG01 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Trav13n-4A0A0G2JG01 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trav13n-4A0A0G2JG01 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav13n-4A0A0G2JG01 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav13n-4A0A0G2JG01 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav13n-4A0A0G2JG01 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.41■□□□□ 0.86
Trav13n-4A0A0G2JG01 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13n-4A0A0G2JG01 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav13n-4A0A0G2JG01 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav13n-4A0A0G2JG01 Mipep-204ENSMUST00000225043 1548 ntBASIC20.38■□□□□ 0.85
Trav13n-4A0A0G2JG01 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13n-4A0A0G2JG01 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav13n-4A0A0G2JG01 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
Trav13n-4A0A0G2JG01 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Trav13n-4A0A0G2JG01 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav13n-4A0A0G2JG01 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13n-4A0A0G2JG01 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav13n-4A0A0G2JG01 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.36■□□□□ 0.85
Trav13n-4A0A0G2JG01 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13n-4A0A0G2JG01 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13n-4A0A0G2JG01 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav13n-4A0A0G2JG01 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav13n-4A0A0G2JG01 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav13n-4A0A0G2JG01 Peli2-204ENSMUST00000226513 1320 ntBASIC20.33■□□□□ 0.85
Trav13n-4A0A0G2JG01 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav13n-4A0A0G2JG01 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav13n-4A0A0G2JG01 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13n-4A0A0G2JG01 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav13n-4A0A0G2JG01 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trav13n-4A0A0G2JG01 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13n-4A0A0G2JG01 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav13n-4A0A0G2JG01 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav13n-4A0A0G2JG01 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav13n-4A0A0G2JG01 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.28■□□□□ 0.84
Trav13n-4A0A0G2JG01 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav13n-4A0A0G2JG01 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms