Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.33■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.33■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Mipep-204ENSMUST00000225043 1548 ntBASIC18.3■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-49A0A0A6YWX2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.25■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-49A0A0A6YWX2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.2■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-49A0A0A6YWX2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.16■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv1-49A0A0A6YWX2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-49A0A0A6YWX2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.14■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Gm27322-201ENSMUST00000184007 104 ntBASIC18.13■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-49A0A0A6YWX2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.12■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.09■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-49A0A0A6YWX2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv1-49A0A0A6YWX2 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.06■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.03■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Ighv1-49A0A0A6YWX2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-49A0A0A6YWX2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-49A0A0A6YWX2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.94■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-49A0A0A6YWX2 Gm26115-201ENSMUST00000175605 87 ntBASIC17.89■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-49A0A0A6YWX2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.84■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-49A0A0A6YWX2 Gm8109-201ENSMUST00000194076 746 ntBASIC17.83■□□□□ 0.44
Ighv1-49A0A0A6YWX2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms