Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-9A0A0A6YW37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-9A0A0A6YW37 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.5■□□□□ 0.71
Ighv1-9A0A0A6YW37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-9A0A0A6YW37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-9A0A0A6YW37 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ighv1-9A0A0A6YW37 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.47■□□□□ 0.71
Ighv1-9A0A0A6YW37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-9A0A0A6YW37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.45■□□□□ 0.7
Ighv1-9A0A0A6YW37 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-9A0A0A6YW37 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-9A0A0A6YW37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ighv1-9A0A0A6YW37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-9A0A0A6YW37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-9A0A0A6YW37 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.41■□□□□ 0.7
Ighv1-9A0A0A6YW37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-9A0A0A6YW37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-9A0A0A6YW37 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ighv1-9A0A0A6YW37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ighv1-9A0A0A6YW37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-9A0A0A6YW37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.37■□□□□ 0.69
Ighv1-9A0A0A6YW37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-9A0A0A6YW37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-9A0A0A6YW37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-9A0A0A6YW37 Gm27322-201ENSMUST00000184007 104 ntBASIC19.35■□□□□ 0.69
Ighv1-9A0A0A6YW37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-9A0A0A6YW37 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ighv1-9A0A0A6YW37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ighv1-9A0A0A6YW37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-9A0A0A6YW37 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.34■□□□□ 0.69
Ighv1-9A0A0A6YW37 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.34■□□□□ 0.69
Ighv1-9A0A0A6YW37 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ighv1-9A0A0A6YW37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-9A0A0A6YW37 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-9A0A0A6YW37 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-9A0A0A6YW37 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.31■□□□□ 0.68
Ighv1-9A0A0A6YW37 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.31■□□□□ 0.68
Ighv1-9A0A0A6YW37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-9A0A0A6YW37 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Ighv1-9A0A0A6YW37 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.29■□□□□ 0.68
Ighv1-9A0A0A6YW37 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ighv1-9A0A0A6YW37 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-9A0A0A6YW37 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-9A0A0A6YW37 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ighv1-9A0A0A6YW37 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-9A0A0A6YW37 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-9A0A0A6YW37 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-9A0A0A6YW37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-9A0A0A6YW37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-9A0A0A6YW37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-9A0A0A6YW37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-9A0A0A6YW37 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-9A0A0A6YW37 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-9A0A0A6YW37 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-9A0A0A6YW37 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-9A0A0A6YW37 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-9A0A0A6YW37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ighv1-9A0A0A6YW37 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-9A0A0A6YW37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-9A0A0A6YW37 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-9A0A0A6YW37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-9A0A0A6YW37 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-9A0A0A6YW37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-9A0A0A6YW37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-9A0A0A6YW37 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-9A0A0A6YW37 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-9A0A0A6YW37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-9A0A0A6YW37 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-9A0A0A6YW37 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-9A0A0A6YW37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-9A0A0A6YW37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ighv1-9A0A0A6YW37 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-9A0A0A6YW37 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-9A0A0A6YW37 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-9A0A0A6YW37 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-9A0A0A6YW37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-9A0A0A6YW37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-9A0A0A6YW37 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Ighv1-9A0A0A6YW37 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-9A0A0A6YW37 Gm26115-201ENSMUST00000175605 87 ntBASIC19.05■□□□□ 0.64
Ighv1-9A0A0A6YW37 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-9A0A0A6YW37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ighv1-9A0A0A6YW37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-9A0A0A6YW37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-9A0A0A6YW37 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-9A0A0A6YW37 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-9A0A0A6YW37 Zxda-201ENSMUST00000117281 2621 ntBASIC19.02■□□□□ 0.64
Ighv1-9A0A0A6YW37 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.02■□□□□ 0.63
Ighv1-9A0A0A6YW37 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-9A0A0A6YW37 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-9A0A0A6YW37 Gm8109-201ENSMUST00000194076 746 ntBASIC19.01■□□□□ 0.63
Ighv1-9A0A0A6YW37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ighv1-9A0A0A6YW37 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-9A0A0A6YW37 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ighv1-9A0A0A6YW37 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-9A0A0A6YW37 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-9A0A0A6YW37 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-9A0A0A6YW37 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-9A0A0A6YW37 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.98■□□□□ 0.63
Ighv1-9A0A0A6YW37 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms