Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-23A0A0A6YVW3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ighv1-23A0A0A6YVW3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-23A0A0A6YVW3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Gm25262-201ENSMUST00000174934 133 ntBASIC19.18■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.15■□□□□ 0.66
Ighv1-23A0A0A6YVW3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.14■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Zxda-201ENSMUST00000117281 2621 ntBASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Mipep-204ENSMUST00000225043 1548 ntBASIC19.1■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-23A0A0A6YVW3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.04■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.04■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ighv1-23A0A0A6YVW3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-23A0A0A6YVW3 AL845457.1-201ENSMUST00000197244 68 ntBASIC19■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.99■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-23A0A0A6YVW3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Ighv1-23A0A0A6YVW3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-23A0A0A6YVW3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-23A0A0A6YVW3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Ighv1-23A0A0A6YVW3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-23A0A0A6YVW3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Ighv1-23A0A0A6YVW3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-23A0A0A6YVW3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.83■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-23A0A0A6YVW3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.81■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.77■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-23A0A0A6YVW3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-23A0A0A6YVW3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.72■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-23A0A0A6YVW3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms