Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.72■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.67■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trav13-4-dv7A0A075B6C2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Mipep-204ENSMUST00000225043 1548 ntBASIC17.58■□□□□ 0.41
Trav13-4-dv7A0A075B6C2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.56■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13-4-dv7A0A075B6C2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.5■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.48■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Zxda-201ENSMUST00000117281 2621 ntBASIC17.46■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav13-4-dv7A0A075B6C2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13-4-dv7A0A075B6C2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.33■□□□□ 0.37
Trav13-4-dv7A0A075B6C2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Gm25262-201ENSMUST00000174934 133 ntBASIC17.31■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13-4-dv7A0A075B6C2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Amer2-203ENSMUST00000225247 2662 ntBASIC17.22■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms