Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 HMGA1P1-201ENST00000415560 1062 ntBASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 ACTBP11-201ENST00000436287 1126 ntBASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AL022328.3-201ENST00000607943 679 ntBASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 MIR497HG-202ENST00000572453 3838 ntBASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HLA-DRB4X5D2U9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MEX3B-202ENST00000558133 4333 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 DLX4-206ENST00000611342 1662 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 TSPY25P-201ENST00000429463 745 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 RCC2P8-201ENST00000502779 1035 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AC044849.1-201ENST00000519737 1188 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 KRT18P8-201ENST00000581937 1246 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 AL157813.1-201ENST00000612996 587 ntBASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HLA-DRB4X5D2U9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms