Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.17□□□□□ -0.3
IFT52Q9Y366 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFT52Q9Y366 MKRN5P-201ENST00000445263 1467 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 RPL13AP3-202ENST00000494676 1473 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 ANKRD19P-201ENST00000338192 862 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC099336.1-201ENST00000417053 1171 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 FAM21FP-201ENST00000426241 1131 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC092580.1-201ENST00000433998 658 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 HSPB1P2-201ENST00000448722 546 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 GOLGA2P8-201ENST00000505201 779 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC010328.2-201ENST00000597698 1111 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC133552.6-201ENST00000613406 534 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 MIR6775-201ENST00000617557 69 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC012531.1-201ENST00000562848 2680 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC018629.1-201ENST00000623381 1736 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFT52Q9Y366 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.16□□□□□ -0.3
IFT52Q9Y366 AC015819.3-201ENST00000624305 2674 ntBASIC13.16□□□□□ -0.3
IFT52Q9Y366 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
IFT52Q9Y366 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IFT52Q9Y366 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.15□□□□□ -0.3
IFT52Q9Y366 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.15□□□□□ -0.3
IFT52Q9Y366 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IFT52Q9Y366 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.15□□□□□ -0.3
IFT52Q9Y366 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IFT52Q9Y366 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.15□□□□□ -0.3
IFT52Q9Y366 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
IFT52Q9Y366 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
IFT52Q9Y366 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms