Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UPF2Q9HAU5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 CES1P1-201ENST00000421606 1704 ntBASIC17.21■□□□□ 0.35
UPF2Q9HAU5 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AP003969.2-201ENST00000623739 2275 ntBASIC17.21■□□□□ 0.35
UPF2Q9HAU5 C2-209ENST00000452323 1999 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 DUX4L46-201ENST00000566845 751 ntBASIC17.21■□□□□ 0.35
UPF2Q9HAU5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FMO6P-201ENST00000236166 1620 ntBASIC17.21■□□□□ 0.35
UPF2Q9HAU5 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
UPF2Q9HAU5 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UPF2Q9HAU5 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AL139158.3-201ENST00000641212 1562 ntBASIC17.2■□□□□ 0.34
UPF2Q9HAU5 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AJ011932.1-201ENST00000621707 465 ntBASIC17.2■□□□□ 0.34
UPF2Q9HAU5 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC17.2■□□□□ 0.34
UPF2Q9HAU5 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms