Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 AC007336.3-201ENST00000623886 2160 ntBASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 AC242376.1-201ENST00000559033 726 ntBASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 DGAT2L7P-201ENST00000602462 744 ntBASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 AL805961.1-201ENST00000642026 753 ntBASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PCDHA6-201ENST00000378126 3267 ntBASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHROOM3Q8TF72 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 CR383656.2-201ENST00000548656 2254 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SIGLEC22P-201ENST00000599104 714 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL031673.1-201ENST00000611460 466 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC006453.1-201ENST00000636037 1257 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC019193.1-201ENST00000506678 823 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 TMCO5B-205ENST00000530020 894 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC132825.4-202ENST00000578792 434 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC132812.1-201ENST00000583145 892 ntBASIC14.16□□□□□ -0.14
SHROOM3Q8TF72 AC007326.1-201ENST00000604539 458 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms