Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC099063.4-201ENST00000641099 1602 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 RNA5SP84-201ENST00000364740 107 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CFL1P6-201ENST00000400899 494 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 HMGA1P2-201ENST00000430198 324 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC104115.1-201ENST00000484005 623 ntBASIC16.53■□□□□ 0.24
SNED1Q8TER0 AK2-208ENST00000487289 920 ntTSL 2 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNED1Q8TER0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SNED1Q8TER0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.52■□□□□ 0.24
SNED1Q8TER0 AC012358.2-201ENST00000430010 1434 ntBASIC16.52■□□□□ 0.24
SNED1Q8TER0 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SNED1Q8TER0 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC16.52■□□□□ 0.24
SNED1Q8TER0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.52■□□□□ 0.24
SNED1Q8TER0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.52■□□□□ 0.24
SNED1Q8TER0 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 AC027601.5-201ENST00000624065 2482 ntBASIC16.52■□□□□ 0.24
SNED1Q8TER0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SNED1Q8TER0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 SAP18P2-201ENST00000434334 459 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC092865.2-201ENST00000439409 971 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 SRP9P1-201ENST00000445874 261 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC053503.3-201ENST00000448375 114 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 AP001102.1-201ENST00000528959 409 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC133555.4-201ENST00000569081 152 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AL356740.1-201ENST00000602192 1297 ntBASIC16.52■□□□□ 0.23
SNED1Q8TER0 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 MDC1-209ENST00000613547 830 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.52■□□□□ 0.23
SNED1Q8TER0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SNED1Q8TER0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 ERG-211ENST00000453032 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 RPL4P6-201ENST00000438116 1304 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AL157832.2-205ENST00000597245 1649 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms