Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 AL157792.1-201ENST00000488281 530 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 CYP4F36P-201ENST00000589193 186 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 TYMSP2-201ENST00000589501 424 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 AC244250.3-201ENST00000620749 366 ntBASIC21.33■■□□□ 1.01
VPS8Q8N3P4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VPS8Q8N3P4 SRL-202ENST00000537996 1814 ntTSL 2 BASIC21.33■■□□□ 1
VPS8Q8N3P4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS8Q8N3P4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS8Q8N3P4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
VPS8Q8N3P4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 AC010327.5-201ENST00000586923 3061 ntBASIC21.32■■□□□ 1
VPS8Q8N3P4 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 ZSCAN5DP-201ENST00000600684 1488 ntBASIC21.32■■□□□ 1
VPS8Q8N3P4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
VPS8Q8N3P4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.32■■□□□ 1
VPS8Q8N3P4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 AC104961.1-201ENST00000427605 771 ntBASIC21.32■■□□□ 1
VPS8Q8N3P4 RPE-208ENST00000436630 1128 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.32■■□□□ 1
VPS8Q8N3P4 AC055811.3-201ENST00000584952 686 ntBASIC21.32■■□□□ 1
VPS8Q8N3P4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VPS8Q8N3P4 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC21.32■■□□□ 1
VPS8Q8N3P4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS8Q8N3P4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 KRT8P25-201ENST00000473150 1456 ntBASIC21.32■■□□□ 1
VPS8Q8N3P4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC21.32■■□□□ 1
VPS8Q8N3P4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
VPS8Q8N3P4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC21.31■■□□□ 1
VPS8Q8N3P4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.31■■□□□ 1
VPS8Q8N3P4 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 AL160191.2-201ENST00000603975 601 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC21.31■■□□□ 1
VPS8Q8N3P4 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC21.31■■□□□ 1
VPS8Q8N3P4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A21P-201ENST00000510875 1396 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A15P-201ENST00000514465 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A6P-201ENST00000515148 1394 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A16P-201ENST00000526662 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A9P-201ENST00000527940 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A5P-201ENST00000528738 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A14P-201ENST00000530386 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 FAM90A13P-201ENST00000534703 1395 ntBASIC21.31■■□□□ 1
VPS8Q8N3P4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS8Q8N3P4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC21.3■■□□□ 1
VPS8Q8N3P4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms