Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 LDHAL6FP-201ENST00000405916 1082 ntBASIC12.59□□□□□ -0.39
ATRXP46100 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.59□□□□□ -0.39
ATRXP46100 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ATRXP46100 HNRNPA1P3-201ENST00000440968 551 ntBASIC12.59□□□□□ -0.39
ATRXP46100 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC12.59□□□□□ -0.39
ATRXP46100 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC12.59□□□□□ -0.39
ATRXP46100 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC12.59□□□□□ -0.39
ATRXP46100 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC12.59□□□□□ -0.39
ATRXP46100 RBP1-206ENST00000617459 667 ntTSL 2 BASIC12.59□□□□□ -0.39
ATRXP46100 AL137028.1-201ENST00000620521 555 ntBASIC12.59□□□□□ -0.39
ATRXP46100 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC12.59□□□□□ -0.39
ATRXP46100 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ATRXP46100 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 TUBAP-201ENST00000425085 1352 ntBASIC12.58□□□□□ -0.4
ATRXP46100 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 ACE3P-201ENST00000423435 1973 ntBASIC12.58□□□□□ -0.4
ATRXP46100 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 AC233724.9-201ENST00000511694 407 ntBASIC12.58□□□□□ -0.4
ATRXP46100 OR52P2P-201ENST00000527287 955 ntBASIC12.58□□□□□ -0.4
ATRXP46100 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 AC020658.6-201ENST00000623564 1870 ntBASIC12.58□□□□□ -0.4
ATRXP46100 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.58□□□□□ -0.4
ATRXP46100 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 AC015813.5-201ENST00000624641 1514 ntBASIC12.58□□□□□ -0.4
ATRXP46100 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ATRXP46100 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.58□□□□□ -0.4
ATRXP46100 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATRXP46100 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC092865.2-201ENST00000439409 971 ntBASIC12.57□□□□□ -0.4
ATRXP46100 BNC2-207ENST00000471301 745 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 OR4A49P-201ENST00000527050 632 ntBASIC12.57□□□□□ -0.4
ATRXP46100 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 MIR7704-201ENST00000610524 59 ntBASIC12.57□□□□□ -0.4
ATRXP46100 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ATRXP46100 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC034205.3-201ENST00000603595 1376 ntBASIC12.57□□□□□ -0.4
ATRXP46100 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 GULOP-201ENST00000454030 748 ntBASIC12.57□□□□□ -0.4
ATRXP46100 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC12.57□□□□□ -0.4
ATRXP46100 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 SNORA74.2-201ENST00000516496 180 ntBASIC12.57□□□□□ -0.4
ATRXP46100 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms