Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC18.32■□□□□ 0.52
USP6P35125 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 AL121949.3-201ENST00000406684 385 ntBASIC18.32■□□□□ 0.52
USP6P35125 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC18.32■□□□□ 0.52
USP6P35125 CDKN2A-AS1-201ENST00000441769 823 ntBASIC18.32■□□□□ 0.52
USP6P35125 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.32■□□□□ 0.52
USP6P35125 RNA5SP288-201ENST00000516075 93 ntBASIC18.32■□□□□ 0.52
USP6P35125 AP001102.1-201ENST00000528959 409 ntBASIC18.32■□□□□ 0.52
USP6P35125 URB1-AS1-201ENST00000534991 831 ntBASIC18.32■□□□□ 0.52
USP6P35125 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP6P35125 DUX4L33-201ENST00000635217 958 ntBASIC18.32■□□□□ 0.52
USP6P35125 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP6P35125 AL121753.2-201ENST00000624581 1461 ntBASIC18.31■□□□□ 0.52
USP6P35125 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USP6P35125 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP6P35125 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6P35125 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 RNA5SP84-201ENST00000364740 107 ntBASIC18.31■□□□□ 0.52
USP6P35125 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC18.31■□□□□ 0.52
USP6P35125 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 RPSAP16-201ENST00000447583 821 ntBASIC18.31■□□□□ 0.52
USP6P35125 BICD1P1-201ENST00000457832 1222 ntBASIC18.31■□□□□ 0.52
USP6P35125 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC18.31■□□□□ 0.52
USP6P35125 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC18.31■□□□□ 0.52
USP6P35125 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC18.31■□□□□ 0.52
USP6P35125 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.31■□□□□ 0.52
USP6P35125 RPS5-205ENST00000598495 800 ntTSL 3 BASIC18.31■□□□□ 0.52
USP6P35125 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.31■□□□□ 0.52
USP6P35125 BX322562.1-201ENST00000617004 561 ntBASIC18.31■□□□□ 0.52
USP6P35125 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC18.31■□□□□ 0.52
USP6P35125 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP6P35125 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 ZNF493-208ENST00000599461 1769 ntBASIC18.3■□□□□ 0.52
USP6P35125 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 MANEA-AS1-201ENST00000564541 2268 ntBASIC18.3■□□□□ 0.52
USP6P35125 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6P35125 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP6P35125 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6P35125 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC18.3■□□□□ 0.52
USP6P35125 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.3■□□□□ 0.52
USP6P35125 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
USP6P35125 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC18.3■□□□□ 0.52
USP6P35125 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC18.3■□□□□ 0.52
USP6P35125 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 CR392039.1-201ENST00000623217 204 ntBASIC18.3■□□□□ 0.52
USP6P35125 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP6P35125 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.3■□□□□ 0.52
USP6P35125 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6P35125 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6P35125 RHPN1-AS1-201ENST00000518049 1918 ntBASIC18.29■□□□□ 0.52
USP6P35125 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6P35125 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms